apraga/org - Change 6U6BHU2ITKKYJGHTCIXAO2Q2RLP52EYCXGBC6JYQNJ7XD3TR2QAAC

Adding org-roam id to biblio notes. Missing biblio ref in ID...

Created by Alexis Praga on June 2, 2024

6U6BHU2ITKKYJGHTCIXAO2Q2RLP52EYCXGBC6JYQNJ7XD3TR2QAAC

Dependencies

[2] M6GJ5MQ7PKVD5SKOL3VMTZAEGONBDDRQIXW3LGTJAVCQX77ADRCQC

In channels

main

Change contents

Insertion in notes/biblio/Zverinova2022.org at line 1 [2.384]
[2.384]
[2.385]
```
:PROPERTIES:
:ID:       a4731205-4c0b-4a89-b416-accee9628746
:END:
```

Replacement in notes/biblio/Zverinova2022.org at line 9 [2.384]

B:BD[2.784] → [2.784:903]

- Exome = la plus populaire et la plus rentable (prix proportionnel aux nombre de variants)
- Liste appels de variants

[2.784]

[2.903]

  - Exome = la plus populaire et la plus rentable (prix proportionnel aux nombre de variants)
  - Liste appels de variants

Insertion in notes/biblio/Zhao2020.org at line 1 [2.4734]
[2.4734]
[2.4735]
```
:PROPERTIES:
:ID:       49509ff4-6e75-40c5-accd-7cf19a22fb23
:END:
```
Insertion in notes/biblio/Yen2017.org at line 1 [2.5650]
[2.5650]
[2.5651]
```
:PROPERTIES:
:ID:       79b0174f-dc8b-4b8d-a586-023f86da189f
:END:
```
Insertion in notes/biblio/Wang2010.org at line 1 [2.8784]
[2.8784]
[2.8785]
```
:PROPERTIES:
:ID:       6a47d6bc-091a-4aa3-afd1-fcf2a0a4e1e2
:END:
```
Deletion in notes/biblio/VanDerAuwera2013.org at line 1 [2.10274]
B:BD[2.10274] → [2.10275:10337]
```
Exemple d'utilisation de GATK best practive.
**** Hard-filter
```
Replacement in notes/biblio/VanDerAuwera2013.org at line 2 [2.10274]
B:BD[2.10350] → [2.10350:10398]
```
:ID:       17aa8b97-b6d1-465e-bcdd-f9dafa9e8f2c
```
[2.10350]
[2.10398]
```
:ID:       04d568ae-62a3-4fb8-bf31-a2b5801a449a
```
Insertion in notes/biblio/VanDerAuwera2013.org at line 4 [2.10274]
[2.10404]
[2.10404]
```
Exemple d'utilisation de GATK best practive.
**** Hard-filter
```
Insertion in notes/biblio/Sherry2001.org at line 1 [2.10621]
[2.10621]
[2.10622]
```
:PROPERTIES:
:ID:       b200d02e-475b-40c9-8aa2-32f16d04d2bc
:END:
```
Insertion in notes/biblio/Schneider2017.org at line 1 [2.11576]
[2.11576]
[2.11577]
```
:PROPERTIES:
:ID:       735aa970-adb6-4402-a532-1b38efa70aad
:END:
```
Insertion in notes/biblio/Rimmer2014.org at line 1 [2.14310]
[2.14310]
[2.14311]
```
:PROPERTIES:
:ID:       0d5892d4-cb09-446c-b432-350486b9ec3d
:END:
```
Insertion in notes/biblio/Rhie2023.org at line 1 [2.16276]
[2.16276]
[2.16277]
```
:PROPERTIES:
:ID:       aa07aa1e-d0de-43cc-b0b2-04dc9bf9065b
:END:
```
Insertion in notes/biblio/Poplin2018.org at line 1 [2.17792]
[2.17792]
[2.17793]
```
:PROPERTIES:
:ID:       f0084af1-50cd-4222-81f4-f89f67aed213
:END:
```
Insertion in notes/biblio/Poplin2017.org at line 1 [2.18861]
[2.18861]
[2.18862]
```
:PROPERTIES:
:ID:       058149e3-94ed-476d-a6a6-959e04a6fcac
:END:
```
Insertion in notes/biblio/Pei2021.org at line 1 [2.20653]
[2.20653]
[2.20654]
```
:PROPERTIES:
:ID:       86021c82-dcb1-4c03-a7e3-0daed5511ca4
:END:
```
Insertion in notes/biblio/Musich2021.org at line 1 [2.22857]
[2.22857]
[2.22858]
```
:PROPERTIES:
:ID:       1871990d-00da-4c65-a747-8f8b492c2fe4
:END:
```
Insertion in notes/biblio/Miga2014.org at line 1 [2.23439]
[2.23439]
[2.23440]
```
:PROPERTIES:
:ID:       94740ca4-78bd-4db5-8d21-e01126fe7a02
:END:
```
Insertion in notes/biblio/Mclaren.org at line 1 [2.23601]
[2.23601]
[2.23602]
```
:PROPERTIES:
:ID:       03085765-8f7b-4480-8727-aa5f7aa8381f
:END:
```
Insertion in notes/biblio/Liao2023.org at line 1 [2.27804]
[2.27804]
[2.27805]
```
:PROPERTIES:
:ID:       3497e7fd-bb22-487a-a2e0-a7e3468e2534
:END:
```
Insertion in notes/biblio/Li2021.org at line 1 [2.29036]
[2.29036]
[2.29037]
```
:PROPERTIES:
:ID:       8b820a49-29d5-4a19-86a5-07aef08829dd
:END:
```
Insertion in notes/biblio/Landrum2016.org at line 1 [2.29133]
[2.29133]
[2.29134]
```
:PROPERTIES:
:ID:       90872a02-78e8-44f6-8104-1071775e3a26
:END:
```
Insertion in notes/biblio/Kumaran2019.org at line 1 [2.31653]
[2.31653]
[2.31654]
```
:PROPERTIES:
:ID:       1505e35d-b84a-4695-ba19-74c96c767f73
:END:
```
Insertion in notes/biblio/Koboldt2009.org at line 1 [2.34438]
[2.34438]
[2.34439]
```
:PROPERTIES:
:ID:       36419cf6-f6f1-47e8-a1b9-5c2f6cca4213
:END:
```
Insertion in notes/biblio/Kim2018.org at line 1 [2.34774]
[2.34774]
[2.34775]
```
:PROPERTIES:
:ID:       b8da404c-1ce6-43b6-9e4d-7d34225f1e8f
:END:
```
Insertion in notes/biblio/Jarvis2022.org at line 1 [2.35998]
[2.35998]
[2.35999]
```
:PROPERTIES:
:ID:       2a9bcff3-0753-40c6-a76d-f9b8782b345f
:END:
```
Insertion in notes/biblio/Hwang2019.org at line 1 [2.37140]
[2.37140]
[2.37141]
```
:PROPERTIES:
:ID:       95251dd4-5713-4c94-b774-11659b701afe
:END:
```
Insertion in notes/biblio/Hwang2015.org at line 1 [2.40922]
[2.40922]
[2.40923]
```
:PROPERTIES:
:ID:       5071e292-550c-483d-858e-0674a84184a2
:END:
```
Insertion in notes/biblio/Hu2021.org at line 1 [2.43925]
[2.43925]
[2.43926]
```
:PROPERTIES:
:ID:       25bd9227-8b23-423e-adb0-e1ef5ba1ced4
:END:
```
Insertion in notes/biblio/Hatem2013.org at line 1 [2.44954]
[2.44954]
[2.44955]
```
:PROPERTIES:
:ID:       666c0eb2-e956-480a-8a29-bbfdcdf2863b
:END:
```
Insertion in notes/biblio/Goodwin2016.org at line 1 [2.45823]
[2.45823]
[2.45824]
```
:PROPERTIES:
:ID:       14bbd732-3495-4f64-b153-739d0318bfc3
:END:
```
Insertion in notes/biblio/Garrison2012.org at line 1 [2.46324]
[2.46324]
[2.46325]
```
:PROPERTIES:
:ID:       bf860cd5-2946-4418-9b87-1f687ae97b89
:END:
```
Insertion in notes/biblio/Firtina2016.org at line 1 [2.48455]
[2.48455]
[2.48456]
```
:PROPERTIES:
:ID:       1201f058-5767-47b1-9f25-dd0d606b2676
:END:
```
Insertion in notes/biblio/Donato2021.org at line 1 [2.48679]
[2.48679]
[2.48680]
```
:PROPERTIES:
:ID:       a7083115-3833-4a47-8520-4bfc2b08bd3a
:END:
```
Insertion in notes/biblio/Cingolani2012.org at line 1 [2.52016]
[2.52016]
[2.52017]
```
:PROPERTIES:
:ID:       f1c7c3e7-366c-4679-a690-75f2faeed7fa
:END:
```

Insertion in notes/biblio/Chen2019.org at line 1 [2.54015]

[2.54015]

[2.54016]

:PROPERTIES:
:ID:       817481c5-3bca-4044-8319-cdf19daf6301
:ROAM_REFS: @Chen2019
:END:

Insertion in notes/biblio/Chen2019.org at line 6 [2.54015]
[2.54071]
[2.54071]
Insertion in notes/biblio/Carey.org at line 1 [2.57829]
[2.57829]
[2.57830]
```
:PROPERTIES:
:ID:       26acd7bc-7e44-4427-bf11-d79062b783a3
:END:
```
Insertion in notes/biblio/Betschart2022.org at line 1 [2.58245]
[2.58245]
[2.58246]
```
:PROPERTIES:
:ID:       690b8ced-c76b-4dae-bb01-90eaccceda44
:END:
```
Insertion in notes/biblio/Barbitoff2022.org at line 1 [2.59184]
[2.59184]
[2.59185]
```
:PROPERTIES:
:ID:       5cc49977-98bc-4dfc-9d55-57617fa0755a
:END:
```
Insertion in notes/biblio/Baid2020.org at line 1 [2.61612]
[2.61612]
[2.61613]
```
:PROPERTIES:
:ID:       24432ccb-8568-433b-8686-f653e1ef2607
:END:
```
Insertion in notes/biblio/Auwera2020.org at line 1 [2.62685]
[2.62685]
[2.62686]
```
:PROPERTIES:
:ID:       5b83e258-f4ad-403b-a10f-74b8fc5184be
:END:
```
Insertion in notes/biblio/Amberger2015.org at line 1 [2.64376]
[2.64376]
[2.64377]
```
:PROPERTIES:
:ID:       8be729e9-b9a9-4855-b588-59fc04d575a3
:END:
```

Insertion in notes/biblio/Alser2021.org at line 1 [2.67082]

[2.67082]

[2.67083]

:PROPERTIES:
:ID:       f25927b1-797c-4c9d-89d5-f0bb10be9bd2
:ROAM_REFS: @Alser2021
:END:

Insertion in notes/biblio/Alser2021.org at line 6 [2.67082]
[2.67105]
[2.67105]
Insertion in notes/biblio/Alganmi2023.org at line 1 [2.104442]
[2.104442]
[2.104443]
```
:PROPERTIES:
:ID:       b2802d9c-0987-4857-a0ea-e40e94a2a9f6
:END:
```
Insertion in notes/biblio/Aganezov2022.org at line 1 [2.104769]
[2.104769]
[2.104770]
```
:PROPERTIES:
:ID:       bb146ba2-d435-435e-8056-e7e6fa407a59
:END:
```

Adding org-roam id to biblio notes. Missing biblio ref in ID...

Dependencies

In channels

Change contents

Insertion in notes/biblio/Zverinova2022.org at line 1 [2.384]

Replacement in notes/biblio/Zverinova2022.org at line 9 [2.384]

Insertion in notes/biblio/Zhao2020.org at line 1 [2.4734]

Insertion in notes/biblio/Yen2017.org at line 1 [2.5650]

Insertion in notes/biblio/Wang2010.org at line 1 [2.8784]

Deletion in notes/biblio/VanDerAuwera2013.org at line 1 [2.10274]

Replacement in notes/biblio/VanDerAuwera2013.org at line 2 [2.10274]

Insertion in notes/biblio/VanDerAuwera2013.org at line 4 [2.10274]

Insertion in notes/biblio/Sherry2001.org at line 1 [2.10621]

Insertion in notes/biblio/Schneider2017.org at line 1 [2.11576]

Insertion in notes/biblio/Rimmer2014.org at line 1 [2.14310]

Insertion in notes/biblio/Rhie2023.org at line 1 [2.16276]

Insertion in notes/biblio/Poplin2018.org at line 1 [2.17792]

Insertion in notes/biblio/Poplin2017.org at line 1 [2.18861]

Insertion in notes/biblio/Pei2021.org at line 1 [2.20653]

Insertion in notes/biblio/Musich2021.org at line 1 [2.22857]

Insertion in notes/biblio/Miga2014.org at line 1 [2.23439]

Insertion in notes/biblio/Mclaren.org at line 1 [2.23601]

Insertion in notes/biblio/Liao2023.org at line 1 [2.27804]

Insertion in notes/biblio/Li2021.org at line 1 [2.29036]

Insertion in notes/biblio/Landrum2016.org at line 1 [2.29133]

Insertion in notes/biblio/Kumaran2019.org at line 1 [2.31653]

Insertion in notes/biblio/Koboldt2009.org at line 1 [2.34438]

Insertion in notes/biblio/Kim2018.org at line 1 [2.34774]

Insertion in notes/biblio/Jarvis2022.org at line 1 [2.35998]

Insertion in notes/biblio/Hwang2019.org at line 1 [2.37140]

Insertion in notes/biblio/Hwang2015.org at line 1 [2.40922]

Insertion in notes/biblio/Hu2021.org at line 1 [2.43925]

Insertion in notes/biblio/Hatem2013.org at line 1 [2.44954]

Insertion in notes/biblio/Goodwin2016.org at line 1 [2.45823]

Insertion in notes/biblio/Garrison2012.org at line 1 [2.46324]

Insertion in notes/biblio/Firtina2016.org at line 1 [2.48455]

Insertion in notes/biblio/Donato2021.org at line 1 [2.48679]

Insertion in notes/biblio/Cingolani2012.org at line 1 [2.52016]

Insertion in notes/biblio/Chen2019.org at line 1 [2.54015]

Insertion in notes/biblio/Chen2019.org at line 6 [2.54015]

Insertion in notes/biblio/Carey.org at line 1 [2.57829]

Insertion in notes/biblio/Betschart2022.org at line 1 [2.58245]

Insertion in notes/biblio/Barbitoff2022.org at line 1 [2.59184]

Insertion in notes/biblio/Baid2020.org at line 1 [2.61612]

Insertion in notes/biblio/Auwera2020.org at line 1 [2.62685]

Insertion in notes/biblio/Amberger2015.org at line 1 [2.64376]

Insertion in notes/biblio/Alser2021.org at line 1 [2.67082]

Insertion in notes/biblio/Alser2021.org at line 6 [2.67082]

Insertion in notes/biblio/Alganmi2023.org at line 1 [2.104442]

Insertion in notes/biblio/Aganezov2022.org at line 1 [2.104769]