{"header":{"message":"AMR is now adaptive\n","description":null,"timestamp":"2019-07-25T20:17:27Z","authors":[{"email":"schnetter@gmail.com","name":"Erik Schnetter"}]},"hash":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC","authors":[],"deps":{"hashes":[["33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC","AMR is now adaptive\n"],["AA",null],["7Y37CMWGUQY3IOMFZW46UINY2W5DIEE3TXGN7RDKYZO6FHCLHDBQC","Azure pipelines: Reduce problem size for test case\n"],["S7LV6VRMBSJPJ765HYMGC5IZ4LCQRJ7VH3D3E36PD6LHVGPQWNYAC","AMR now with 3 levels\n"],["2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC","AMR evolution should work now\n"],["UZAKARMGORRQG733ZUPJOEGL5FG243I32NCC2SRSFDCZKUQ5A52QC","Store time levels separately\n"],["VAF66DTVLDWNG7N2PEQYEH4OH5SPSMFBXKPR2PU67IIM6CVPCJ7AC","Implement reduction operations\n"],["WASO7G5FJXRXWNH2U2FLUNEKU6VE63OI3HUYP64BVD4LMD6KE7OQC","Begin to support multiple refinement levels\n"],["MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC","Snapshot before transitioning from AmrMesh to AmrCore\n"],["BVR7DVINVPQG7PA6Z7QYVYNQ43YZL7XCC6AOMSMWMGAAB2Q43STAC","Set up cctkGH entries\n"],["UUGQGVC4WEKN64WAP7F5QPS2UHGQB5ZLMFRIYNWKMIEBDO3QRX4AC","Overload evolution manager\n"],["KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC","AMR works\n"],["PQB3EKQ6MBCXPTW4HB7SGMSTOTYMB3EFZX2573OFCQI6PSOEKCSQC","Use thread-local cGH structures for multi-threading\n"],["2XYZZL42IEZHGDJA6NDKGSQKGJP24LOTLFJ6RNHOKWHHSUYIHGKQC","AMR works now, this time even with prolongation\n"],["U77PE56ICORZNQW33NXGSEMW7GDHCSSZ4EXB6OHBJSHEG6WHYSSQC","Register schedule traverse functions\n"],["ORAAQXS3UNKXYDJBCTHNEIDJIZDHWMM5EVCZKVMFRKQK2NIQNJGAC","Move tile iterator to CallFunction\n"],["TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC","Make AMR adaptive (for initial conditions)\n"],["TOBGHRPKEPSXDN56WGSZNWOMCBVJ4KUSLWYWI56MC2RR3MM3KLZAC","Restrict during evolution\n"],["2DD222JSYRPHTXKSRXLSOMSCQPZUORNFLLO2P3GMIDELAAMD5MEQC","Rename some ghext variables\n"],["AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC","Handle grid function pointers in driver\n"],["722HZ7UFINNE3YKSYKP2NHZ5XEG5QQLQHSKC7PREJZR3EX6RDYUAC","Import initial AMReX driver for Cactus\n"],["RTNZAS3UPI6GG3KY4Z5WVXJ4R2YF5427BB6WAV3GHRS5W7XPOSUQC","Initialize coordinates in the driver\n"],["QN2UTSQP4IMCMVXZNR24J22N24ASGXF6EWXQ2P3VWVQERUPFAFDQC","Use AmrMesh class\n"]],"deps":["7Y37CMWGUQY3IOMFZW46UINY2W5DIEE3TXGN7RDKYZO6FHCLHDBQC"],"known":["722HZ7UFINNE3YKSYKP2NHZ5XEG5QQLQHSKC7PREJZR3EX6RDYUAC","U77PE56ICORZNQW33NXGSEMW7GDHCSSZ4EXB6OHBJSHEG6WHYSSQC","ORAAQXS3UNKXYDJBCTHNEIDJIZDHWMM5EVCZKVMFRKQK2NIQNJGAC","BVR7DVINVPQG7PA6Z7QYVYNQ43YZL7XCC6AOMSMWMGAAB2Q43STAC","AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC","UUGQGVC4WEKN64WAP7F5QPS2UHGQB5ZLMFRIYNWKMIEBDO3QRX4AC","PQB3EKQ6MBCXPTW4HB7SGMSTOTYMB3EFZX2573OFCQI6PSOEKCSQC","WASO7G5FJXRXWNH2U2FLUNEKU6VE63OI3HUYP64BVD4LMD6KE7OQC","UZAKARMGORRQG733ZUPJOEGL5FG243I32NCC2SRSFDCZKUQ5A52QC","2DD222JSYRPHTXKSRXLSOMSCQPZUORNFLLO2P3GMIDELAAMD5MEQC","VAF66DTVLDWNG7N2PEQYEH4OH5SPSMFBXKPR2PU67IIM6CVPCJ7AC","KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC","2XYZZL42IEZHGDJA6NDKGSQKGJP24LOTLFJ6RNHOKWHHSUYIHGKQC","S7LV6VRMBSJPJ765HYMGC5IZ4LCQRJ7VH3D3E36PD6LHVGPQWNYAC","MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC","TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC","TOBGHRPKEPSXDN56WGSZNWOMCBVJ4KUSLWYWI56MC2RR3MM3KLZAC","2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC"]},"hunks":[{"Replacement":{"inode":{"change":3,"pos":17976},"path":"AMReX/interface.ccl","line":11,"ins":{"up_context":[{"change":3,"pos":12}],"down_context":[{"change":3,"pos":41}],"flag":"BLOCK","start":0,"end":31,"inode":{"change":3,"pos":17976}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12},"to":{"change":3,"start":12,"end":41},"introduced_by":3}],"inode":{"change":3,"pos":17976}},"ins_contents":[{"Add":{"text":"CCTK_REAL regrid_error TYPE=gf","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:30"}}],"del_contents":[{"Del":{"text":"CCTK_REAL regrid_tag TYPE=gf","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:40"}}]}},{"Replacement":{"inode":{"change":3,"pos":17976},"path":"AMReX/interface.ccl","line":13,"ins":{"up_context":[{"change":3,"pos":43}],"down_context":[{"change":3,"pos":0}],"flag":"BLOCK","start":32,"end":72,"inode":{"change":3,"pos":17976}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":43},"to":{"change":3,"start":43,"end":69},"introduced_by":3}],"inode":{"change":3,"pos":17976}},"ins_contents":[{"Add":{"text":" regrid_error","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:46"}},{"Add":{"text":"} \"Regridding condition\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:71"}}],"del_contents":[{"Del":{"text":" tag","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:48"}},{"Del":{"text":"} \"Regridding tags\"","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:68"}}]}},{"FileAdd":{"meta":{"basename":"planewave.par","metadata":420},"path":"AMReX/par/planewave.par","context":[{"change":2,"pos":6}],"contents":[{"Add":{"text":"ActiveThorns = \"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:106"}},{"Add":{"text":" AMReX","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:116"}},{"Add":{"text":" IOUtil","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:127"}},{"Add":{"text":" WaveToyAMReX","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:144"}},{"Add":{"text":"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:146"}},{"Add":{"text":" ","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:148"}},{"Add":{"text":"$nlevels = 4","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:161"}},{"Add":{"text":"$ncells = 16","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:174"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:175"}},{"Add":{"text":"Cactus::cctk_show_schedule = no","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:207"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:208"}},{"Add":{"text":"Cactus::cctk_itlast = $ncells * 2 ** ($nlevels - 1) * 2","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:264"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:265"}},{"Add":{"text":"AMReX::verbose = yes","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:286"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:287"}},{"Add":{"text":"AMReX::ncells_x = $ncells","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:313"}},{"Add":{"text":"AMReX::ncells_y = $ncells","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:339"}},{"Add":{"text":"AMReX::ncells_z = $ncells","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:365"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:366"}},{"Add":{"text":"AMReX::max_num_levels = $nlevels","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:399"}},{"Add":{"text":"AMReX::regrid_every = 16","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:424"}},{"Add":{"text":"AMReX::regrid_error_threshold = 0.02 # 0.05 # 0.1","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:478"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:479"}},{"Add":{"text":"AMReX::dtfac = 0.5","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:498"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:499"}},{"Add":{"text":"WaveToyAMReX::initial_condition = \"periodic Gaussian\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:553"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:554"}},{"Add":{"text":"WaveToyAMReX::spatial_frequency_x = 0.5","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:594"}},{"Add":{"text":"WaveToyAMReX::spatial_frequency_y = 0.0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:634"}},{"Add":{"text":"WaveToyAMReX::spatial_frequency_z = 0.0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:674"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:675"}},{"Add":{"text":"IO::out_dir = \"planewave\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:701"}},{"Add":{"text":"IO::out_every = 1 #TODO $ncells * 2 ** ($nlevels - 1) / 2","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:761"}}]}},{"Edit":{"inode":{"change":3,"pos":17918},"path":"AMReX/param.ccl","line":110,"atom":{"NewVertex":{"up_context":[{"change":22,"pos":485}],"down_context":[{"change":22,"pos":485}],"flag":"BLOCK","start":763,"end":883,"inode":{"change":3,"pos":17918}}},"contents":[{"Add":{"text":"CCTK_INT regrid_every \"Regridding interval\" STEERABLE=always","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:823"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:825"}},{"Add":{"text":" 0 :: \"never\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:840"}},{"Add":{"text":" 1:* :: \"every that many iterations\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:878"}},{"Add":{"text":"} 0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:882"}}]}},{"Edit":{"inode":{"change":3,"pos":17918},"path":"AMReX/param.ccl","line":116,"atom":{"NewVertex":{"up_context":[{"change":22,"pos":486}],"down_context":[{"change":3,"pos":948}],"flag":"BLOCK","start":884,"end":985,"inode":{"change":3,"pos":17918}}},"contents":[{"Add":{"text":"CCTK_REAL regrid_error_threshold \"Regridding error threshold\" STEERABLE=always","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:962"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:964"}},{"Add":{"text":" 0.0:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:978"}},{"Add":{"text":"} 1.0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:984"}}]}},{"Edit":{"inode":{"change":3,"pos":17918},"path":"AMReX/param.ccl","line":121,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":949}],"down_context":[{"change":22,"pos":486}],"flag":"BLOCK","start":986,"end":988,"inode":{"change":3,"pos":17918}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:986"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:987"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":11,"atom":{"NewVertex":{"up_context":[{"change":23,"pos":46}],"down_context":[{"change":3,"pos":1194}],"flag":"BLOCK","start":989,"end":1054,"inode":{"change":3,"pos":15972}}},"contents":[{"Add":{"text":"#include ","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1021"}},{"Add":{"text":"#include ","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1053"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":14,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":1223}],"down_context":[{"change":3,"pos":16090}],"flag":"BLOCK","start":1055,"end":1086,"inode":{"change":3,"pos":15972}}},"contents":[{"Add":{"text":"#include ","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1085"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":82,"ins":{"up_context":[{"change":3,"pos":506}],"down_context":[{"change":3,"pos":814}],"flag":"BLOCK","start":1087,"end":1144,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":506},"to":{"change":3,"start":804,"end":830},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":804},"to":{"change":3,"start":804,"end":830},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":830},"to":{"change":3,"start":507,"end":555},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":555},"to":{"change":3,"start":876,"end":877},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":876},"to":{"change":3,"start":876,"end":877},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":877},"to":{"change":3,"start":720,"end":1270},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":1270},"to":{"change":3,"start":758,"end":814},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":758},"to":{"change":3,"start":758,"end":814},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" const int gi = CCTK_GroupIndex(\"AMReX::regrid_error\");","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1143"}}],"del_contents":[{"Del":{"text":" // // refine everywhere","pos":"KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC:829"}},{"Del":{"text":" // tags.setVal(boxArray(level), TagBox::SET);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:554"}},{"Del":{"text":"","pos":"KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC:876"}},{"Del":{"text":" // // refine centre","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:741"}},{"Del":{"text":" // const Box &dom = Geom(level).Domain();","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:785"}},{"Del":{"text":" // Box nbx;","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:799"}},{"Del":{"text":" // for (int d = 0; d < dim; ++d) {","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:836"}},{"Del":{"text":" // int md = (dom.bigEnd(d) + dom.smallEnd(d) + 1) / 2;","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:895"}},{"Del":{"text":" // int rd = (dom.bigEnd(d) - dom.smallEnd(d) + 1) / 2;","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:954"}},{"Del":{"text":" // // mark one fewer cells; AMReX seems to add one cell","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1014"}},{"Del":{"text":" // nbx.setSmall(d, md - rd / (1 << (level + 1)) + 1);","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1072"}},{"Del":{"text":" // nbx.setBig(d, md + rd / (1 << (level + 1)) - 2);","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1128"}},{"Del":{"text":" // }","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1135"}},{"Del":{"text":" // cout << \"EE nbx: \" << nbx << \"\\n\";","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1175"}},{"Del":{"text":" // const BoxArray &ba = boxArray(level);","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1218"}},{"Del":{"text":" // tags.setVal(intersect(ba, nbx), TagBox::SET);","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1269"}},{"Del":{"text":"","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:758"}},{"Del":{"text":" const int gi = CCTK_GroupIndex(\"AMReX::regrid_tag\");","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:813"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":106,"ins":{"up_context":[{"change":3,"pos":1572}],"down_context":[{"change":3,"pos":1646}],"flag":"BLOCK","start":1145,"end":1219,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1572},"to":{"change":3,"start":1572,"end":1646},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" const CCTK_REAL *restrict err = vars.ptr(imin.x, imin.y, imin.z, vi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1218"}}],"del_contents":[{"Del":{"text":" const CCTK_REAL *restrict ptr = vars.ptr(imin.x, imin.y, imin.z, vi);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:1645"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":119,"ins":{"up_context":[{"change":3,"pos":1754}],"down_context":[{"change":3,"pos":2124}],"flag":"BLOCK","start":1220,"end":1300,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1754},"to":{"change":3,"start":1754,"end":1815},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" err[idx] >= regrid_error_threshold ? TagBox::SET : TagBox::CLEAR;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1299"}}],"del_contents":[{"Del":{"text":" ptr[idx] == 0.0 ? TagBox::CLEAR : TagBox::SET;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:1814"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":125,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":1273}],"down_context":[{"change":3,"pos":1273}],"flag":"BLOCK","start":1301,"end":1645,"inode":{"change":3,"pos":15972}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1301"}},{"Add":{"text":"void SetupLevel(int level, const BoxArray &ba, const DistributionMapping &dm) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1381"}},{"Add":{"text":" DECLARE_CCTK_PARAMETERS;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1408"}},{"Add":{"text":" if (verbose)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1423"}},{"Add":{"text":" CCTK_VINFO(\"SetupLevel level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1469"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1470"}},{"Add":{"text":" assert(level == int(ghext->leveldata.size()));","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1519"}},{"Add":{"text":" ghext->leveldata.resize(level + 1);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1557"}},{"Add":{"text":" GHExt::LevelData &leveldata = ghext->leveldata.at(level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1617"}},{"Add":{"text":" leveldata.level = level;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1644"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":136,"ins":{"up_context":[{"change":3,"pos":1274}],"down_context":[{"change":3,"pos":1338}],"flag":"BLOCK","start":1646,"end":2516,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1274},"to":{"change":3,"start":1274,"end":1338},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" const int numgroups = CCTK_NumGroups();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1687"}},{"Add":{"text":" leveldata.groupdata.resize(numgroups);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1728"}},{"Add":{"text":" for (int gi = 0; gi < numgroups; ++gi) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1771"}},{"Add":{"text":" cGroup group;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1789"}},{"Add":{"text":" int ierr = CCTK_GroupData(gi, &group);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1832"}},{"Add":{"text":" assert(!ierr);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1851"}},{"Add":{"text":" assert(group.grouptype == CCTK_GF);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1891"}},{"Add":{"text":" assert(group.vartype == CCTK_VARIABLE_REAL);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1940"}},{"Add":{"text":" assert(group.disttype == CCTK_DISTRIB_DEFAULT);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:1992"}},{"Add":{"text":" assert(group.dim == dim);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2022"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2023"}},{"Add":{"text":" GHExt::LevelData::GroupData &groupdata = leveldata.groupdata.at(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2096"}},{"Add":{"text":" groupdata.firstvarindex = CCTK_FirstVarIndexI(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2151"}},{"Add":{"text":" groupdata.numvars = group.numvars;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2190"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2191"}},{"Add":{"text":" // Allocate grid hierarchies","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2224"}},{"Add":{"text":" groupdata.mfab.resize(group.numtimelevels);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2272"}},{"Add":{"text":" for (int tl = 0; tl < int(groupdata.mfab.size()); ++tl) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2334"}},{"Add":{"text":" groupdata.mfab.at(tl) =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2364"}},{"Add":{"text":" make_unique(ba, dm, groupdata.numvars, ghost_size);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2436"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2442"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2446"}},{"Add":{"text":"}","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2448"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2449"}},{"Add":{"text":"void CactusAmrCore::MakeNewLevelFromScratch(int level, Real time,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2515"}}],"del_contents":[{"Del":{"text":"void CactusAmrCore::MakeNewLevelFromScratch(int lev, Real time,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1337"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":165,"ins":{"up_context":[{"change":3,"pos":1858}],"down_context":[{"change":3,"pos":1534}],"flag":"BLOCK","start":2517,"end":2606,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1858},"to":{"change":3,"start":1858,"end":1915},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" CCTK_VINFO(\"MakeNewLevelFromScratch level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2575"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2576"}},{"Add":{"text":" SetupLevel(level, ba, dm);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2605"}}],"del_contents":[{"Del":{"text":" CCTK_VINFO(\"MakeNewLevelFromScratch level %d\", lev);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:1914"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":170,"ins":{"up_context":[{"change":3,"pos":1537}],"down_context":[{"change":3,"pos":1600}],"flag":"BLOCK","start":2607,"end":2672,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1537},"to":{"change":3,"start":1537,"end":1600},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":"void CactusAmrCore::MakeNewLevelFromCoarse(int level, Real time,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2671"}}],"del_contents":[{"Del":{"text":"void CactusAmrCore::MakeNewLevelFromCoarse(int lev, Real time,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1599"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":175,"ins":{"up_context":[{"change":3,"pos":1958}],"down_context":[{"change":3,"pos":1244}],"flag":"BLOCK","start":2673,"end":4085,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1958},"to":{"change":3,"start":1958,"end":2014},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" CCTK_VINFO(\"MakeNewLevelFromCoarse level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2730"}},{"Add":{"text":" assert(level > 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2751"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2752"}},{"Add":{"text":" SetupLevel(level, ba, dm);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2781"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2782"}},{"Add":{"text":" // Prolongate","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2798"}},{"Add":{"text":" auto &leveldata = ghext->leveldata.at(level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2846"}},{"Add":{"text":" auto &coarseleveldata = ghext->leveldata.at(level - 1);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2904"}},{"Add":{"text":" const int num_groups = CCTK_NumGroups();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2947"}},{"Add":{"text":" for (int gi = 0; gi < num_groups; ++gi) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:2991"}},{"Add":{"text":" auto &restrict groupdata = leveldata.groupdata.at(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3050"}},{"Add":{"text":" auto &restrict coarsegroupdata = coarseleveldata.groupdata.at(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3121"}},{"Add":{"text":" assert(coarsegroupdata.numvars == groupdata.numvars);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3179"}},{"Add":{"text":" PhysBCFunctNoOp cphysbc;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3208"}},{"Add":{"text":" PhysBCFunctNoOp fphysbc;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3237"}},{"Add":{"text":" const IntVect reffact{2, 2, 2};","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3273"}},{"Add":{"text":" // periodic boundaries","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3300"}},{"Add":{"text":" const BCRec bcrec(BCType::int_dir, BCType::int_dir, BCType::int_dir,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3373"}},{"Add":{"text":" BCType::int_dir, BCType::int_dir, BCType::int_dir);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3447"}},{"Add":{"text":" const Vector bcs(groupdata.numvars, bcrec);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3502"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3503"}},{"Add":{"text":" // If there is more than one time level, then we don't","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3562"}},{"Add":{"text":" // prolongate the oldest.","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3592"}},{"Add":{"text":" int ntls = groupdata.mfab.size();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3630"}},{"Add":{"text":" int prolongate_tl = ntls > 1 ? ntls - 1 : ntls;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3682"}},{"Add":{"text":" for (int tl = 0; tl < prolongate_tl; ++tl)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3729"}},{"Add":{"text":" InterpFromCoarseLevel(*groupdata.mfab.at(tl), 0.0,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3786"}},{"Add":{"text":" *coarsegroupdata.mfab.at(tl), 0, 0,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3850"}},{"Add":{"text":" groupdata.numvars, ghext->amrcore->Geom(level - 1),","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:3930"}},{"Add":{"text":" ghext->amrcore->Geom(level), cphysbc, 0, fphysbc, 0,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4011"}},{"Add":{"text":" reffact, &cell_bilinear_interp, bcs, 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4080"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4084"}}],"del_contents":[{"Del":{"text":" CCTK_VINFO(\"MakeNewLevelFromCoarse level %d\", lev);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:2013"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":209,"ins":{"up_context":[{"change":3,"pos":1247}],"down_context":[{"change":3,"pos":1866}],"flag":"BLOCK","start":4086,"end":4160,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1247},"to":{"change":3,"start":1794,"end":1866},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":"void CactusAmrCore::RemakeLevel(int level, Real time, const BoxArray &ba,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4159"}}],"del_contents":[{"Del":{"text":"void CactusAmrCore::RemakeLevel(int lev, Real time, const BoxArray &ba,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:1865"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":213,"ins":{"up_context":[{"change":3,"pos":2057}],"down_context":[{"change":3,"pos":1974}],"flag":"BLOCK","start":4161,"end":6452,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2057},"to":{"change":3,"start":2057,"end":2102},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" CCTK_VINFO(\"RemakeLevel level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4207"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4208"}},{"Add":{"text":" // Copy or prolongate","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4232"}},{"Add":{"text":" auto &leveldata = ghext->leveldata.at(level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4280"}},{"Add":{"text":" const int num_groups = CCTK_NumGroups();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4323"}},{"Add":{"text":" for (int gi = 0; gi < num_groups; ++gi) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4367"}},{"Add":{"text":" auto &restrict groupdata = leveldata.groupdata.at(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4426"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4427"}},{"Add":{"text":" // If there is more than one time level, then we don't","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4486"}},{"Add":{"text":" // prolongate the oldest.","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4516"}},{"Add":{"text":" int ntls = groupdata.mfab.size();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4554"}},{"Add":{"text":" int prolongate_tl = ntls > 1 ? ntls - 1 : ntls;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4606"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4607"}},{"Add":{"text":" if (leveldata.level == 0) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4639"}},{"Add":{"text":" // Coarsest level: Copy from same level","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4685"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4686"}},{"Add":{"text":" // This should not happen","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4718"}},{"Add":{"text":" assert(0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4735"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4736"}},{"Add":{"text":" PhysBCFunctNoOp fphysbc;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4767"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4768"}},{"Add":{"text":" for (int tl = 0; tl < ntls; ++tl) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4810"}},{"Add":{"text":" auto mfab =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4830"}},{"Add":{"text":" make_unique(ba, dm, groupdata.numvars, ghost_size);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4904"}},{"Add":{"text":" if (tl < prolongate_tl)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:4936"}},{"Add":{"text":" FillPatchSingleLevel(*mfab, 0.0, {&*groupdata.mfab.at(tl)}, {0.0}, 0,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5016"}},{"Add":{"text":" 0, groupdata.numvars,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5069"}},{"Add":{"text":" ghext->amrcore->Geom(level), fphysbc, 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5142"}},{"Add":{"text":" groupdata.mfab.at(tl) = move(mfab);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5186"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5194"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5195"}},{"Add":{"text":" } else {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5208"}},{"Add":{"text":" // Refined level: copy from same level and/or prolongate from","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5276"}},{"Add":{"text":" // next coarser level","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5304"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5305"}},{"Add":{"text":" auto &coarseleveldata = ghext->leveldata.at(level - 1);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5367"}},{"Add":{"text":" auto &restrict coarsegroupdata = coarseleveldata.groupdata.at(gi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5440"}},{"Add":{"text":" assert(coarsegroupdata.numvars == groupdata.numvars);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5500"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5501"}},{"Add":{"text":" PhysBCFunctNoOp cphysbc;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5532"}},{"Add":{"text":" PhysBCFunctNoOp fphysbc;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5563"}},{"Add":{"text":" const IntVect reffact{2, 2, 2};","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5601"}},{"Add":{"text":" // periodic boundaries","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5630"}},{"Add":{"text":" const BCRec bcrec(BCType::int_dir, BCType::int_dir, BCType::int_dir,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5705"}},{"Add":{"text":" BCType::int_dir, BCType::int_dir, BCType::int_dir);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5781"}},{"Add":{"text":" const Vector bcs(groupdata.numvars, bcrec);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5838"}},{"Add":{"text":" for (int tl = 0; tl < ntls; ++tl) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5880"}},{"Add":{"text":" auto mfab =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5900"}},{"Add":{"text":" make_unique(ba, dm, groupdata.numvars, ghost_size);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:5974"}},{"Add":{"text":" if (tl < prolongate_tl)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6006"}},{"Add":{"text":" FillPatchTwoLevels(*mfab, 0.0, {&*coarsegroupdata.mfab.at(tl)}, {0.0},","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6087"}},{"Add":{"text":" {&*groupdata.mfab.at(tl)}, {0.0}, 0, 0,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6156"}},{"Add":{"text":" groupdata.numvars, ghext->amrcore->Geom(level - 1),","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6237"}},{"Add":{"text":" ghext->amrcore->Geom(level), cphysbc, 0, fphysbc,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6316"}},{"Add":{"text":" 0, reffact, &cell_bilinear_interp, bcs, 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6389"}},{"Add":{"text":" groupdata.mfab.at(tl) = move(mfab);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6433"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6441"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6447"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6451"}}],"del_contents":[{"Del":{"text":" CCTK_VINFO(\"RemakeLevel level %d\", lev);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:2101"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":274,"ins":{"up_context":[{"change":3,"pos":1977}],"down_context":[{"change":3,"pos":2103}],"flag":"BLOCK","start":6453,"end":6497,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1977},"to":{"change":3,"start":1977,"end":2019},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":"void CactusAmrCore::ClearLevel(int level) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6496"}}],"del_contents":[{"Del":{"text":"void CactusAmrCore::ClearLevel(int lev) {","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:2018"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":277,"ins":{"up_context":[{"change":3,"pos":2145}],"down_context":[{"change":3,"pos":2061}],"flag":"BLOCK","start":6498,"end":6632,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2145},"to":{"change":3,"start":2145,"end":2189},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" CCTK_VINFO(\"ClearLevel level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6543"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6544"}},{"Add":{"text":" assert(level == int(ghext->leveldata.size()) - 1);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6597"}},{"Add":{"text":" ghext->leveldata.resize(level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6631"}}],"del_contents":[{"Del":{"text":" CCTK_VINFO(\"ClearLevel level %d\", lev);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:2188"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":285,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2154},"to":{"change":3,"start":2154,"end":2182},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":2182},"to":{"change":3,"start":1328,"end":1329},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1328},"to":{"change":3,"start":1328,"end":1329},"introduced_by":3}],"inode":{"change":3,"pos":15972}}},"contents":[{"Del":{"text":"void SetupLevel(int level);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:2181"}},{"Del":{"text":"","pos":"KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC:1328"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":387,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2207},"to":{"change":3,"start":2207,"end":2230},"introduced_by":3}],"inode":{"change":3,"pos":15972}}},"contents":[{"Del":{"text":" const int level = 0;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:2229"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":389,"atom":{"EdgeMap":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":2499},"to":{"change":3,"start":2306,"end":2327},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2306},"to":{"change":3,"start":2306,"end":2327},"introduced_by":3}],"inode":{"change":3,"pos":15972}}},"contents":[{"Del":{"text":" SetupLevel(level);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:2326"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":413,"atom":{"EdgeMap":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":3147},"to":{"change":3,"start":2406,"end":2407},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3007},"to":{"change":3,"start":2406,"end":2407},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2406},"to":{"change":3,"start":2406,"end":2407},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2407},"to":{"change":3,"start":3008,"end":3038},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3038},"to":{"change":3,"start":3175,"end":3198},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3175},"to":{"change":3,"start":3175,"end":3198},"introduced_by":3}],"inode":{"change":3,"pos":15972}}},"contents":[{"Del":{"text":"","pos":"KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC:2406"}},{"Del":{"text":" if (numlevels == level + 1)","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3037"}},{"Del":{"text":" SetupLevel(level);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3197"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":415,"ins":{"up_context":[{"change":3,"pos":2630}],"down_context":[{"change":3,"pos":3230}],"flag":"BLOCK","start":6633,"end":6663,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2630},"to":{"change":3,"start":3201,"end":3230},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":"void RegridLevel(int level) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6662"}}],"del_contents":[{"Del":{"text":"void SetupLevel(int level) {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3229"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":418,"ins":{"up_context":[{"change":3,"pos":3217}],"down_context":[{"change":3,"pos":827}],"flag":"BLOCK","start":6664,"end":6711,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3217},"to":{"change":3,"start":3217,"end":3263},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" CCTK_VINFO(\"RegridLevel level %d\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6710"}}],"del_contents":[{"Del":{"text":" CCTK_VINFO(\"SetupLevel level %d\", level);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:3262"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":420,"ins":{"up_context":[{"change":3,"pos":828}],"down_context":[{"change":3,"pos":3389}],"flag":"BLOCK","start":6712,"end":6760,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":828},"to":{"change":3,"start":3302,"end":3389},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" assert(level < int(ghext->leveldata.size()));","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6759"}}],"del_contents":[{"Del":{"text":" assert(level == int(ghext->leveldata.size()));","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3350"}},{"Del":{"text":" ghext->leveldata.resize(level + 1);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3388"}}]}},{"Edit":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":422,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3449},"to":{"change":3,"start":3449,"end":3476},"introduced_by":3}],"inode":{"change":3,"pos":15972}}},"contents":[{"Del":{"text":" leveldata.level = level;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3475"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":423,"ins":{"up_context":[{"change":3,"pos":1033}],"down_context":[{"change":3,"pos":4104}],"flag":"BLOCK","start":6761,"end":6809,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1033},"to":{"change":3,"start":3477,"end":3854},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3854},"to":{"change":3,"start":1821,"end":1822},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":292},"to":{"change":3,"start":1821,"end":1822},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1822},"to":{"change":3,"start":3855,"end":4022},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":4022},"to":{"change":3,"start":415,"end":416},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":1839},"to":{"change":3,"start":415,"end":416},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":415},"to":{"change":3,"start":415,"end":416},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":416},"to":{"change":3,"start":4023,"end":4104},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":" for (auto &groupdata : leveldata.groupdata) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6808"}}],"del_contents":[{"Del":{"text":" const int numgroups = CCTK_NumGroups();","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3518"}},{"Del":{"text":" leveldata.groupdata.resize(numgroups);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3559"}},{"Del":{"text":" for (int gi = 0; gi < numgroups; ++gi) {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3602"}},{"Del":{"text":" cGroup group;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3620"}},{"Del":{"text":" int ierr = CCTK_GroupData(gi, &group);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3663"}},{"Del":{"text":" assert(!ierr);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3682"}},{"Del":{"text":" assert(group.grouptype == CCTK_GF);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3722"}},{"Del":{"text":" assert(group.vartype == CCTK_VARIABLE_REAL);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3771"}},{"Del":{"text":" assert(group.disttype == CCTK_DISTRIB_DEFAULT);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3823"}},{"Del":{"text":" assert(group.dim == dim);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3853"}},{"Del":{"text":"","pos":"2DD222JSYRPHTXKSRXLSOMSCQPZUORNFLLO2P3GMIDELAAMD5MEQC:1821"}},{"Del":{"text":" GHExt::LevelData::GroupData &groupdata = leveldata.groupdata.at(gi);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3927"}},{"Del":{"text":" groupdata.firstvarindex = CCTK_FirstVarIndexI(gi);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:3982"}},{"Del":{"text":" groupdata.numvars = group.numvars;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4021"}},{"Del":{"text":"","pos":"BVR7DVINVPQG7PA6Z7QYVYNQ43YZL7XCC6AOMSMWMGAAB2Q43STAC:415"}},{"Del":{"text":" // Allocate grid hierarchies","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4055"}},{"Del":{"text":" groupdata.mfab.resize(group.numtimelevels);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4103"}}]}},{"Replacement":{"inode":{"change":3,"pos":15972},"path":"AMReX/src/driver.cxx","line":425,"ins":{"up_context":[{"change":3,"pos":4166}],"down_context":[{"change":3,"pos":4374}],"flag":"BLOCK","start":6810,"end":7074,"inode":{"change":3,"pos":15972}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":4166},"to":{"change":3,"start":4166,"end":4219},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":4219},"to":{"change":3,"start":3039,"end":3171},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3171},"to":{"change":3,"start":4351,"end":4374},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":4351},"to":{"change":3,"start":4351,"end":4374},"introduced_by":3}],"inode":{"change":3,"pos":15972}},"ins_contents":[{"Add":{"text":"#warning \"TODO\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6825"}},{"Add":{"text":" assert(0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6842"}},{"Add":{"text":" groupdata.mfab.at(tl) =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6872"}},{"Add":{"text":" make_unique(ghext->amrcore->boxArray(level),","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:6937"}},{"Add":{"text":" ghext->amrcore->DistributionMap(level),","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7009"}},{"Add":{"text":" groupdata.numvars, ghost_size);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7073"}}],"del_contents":[{"Del":{"text":" groupdata.mfab.at(tl) = make_unique(","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4218"}},{"Del":{"text":" ghext->amrcore->boxArray(leveldata.level),","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3091"}},{"Del":{"text":" ghext->amrcore->DistributionMap(leveldata.level), groupdata.numvars,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3170"}},{"Del":{"text":" ghost_size);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4373"}}]}},{"Replacement":{"inode":{"change":3,"pos":15275},"path":"AMReX/src/driver.hxx","line":42,"ins":{"up_context":[{"change":3,"pos":3297}],"down_context":[{"change":3,"pos":3572}],"flag":"BLOCK","start":7075,"end":7140,"inode":{"change":3,"pos":15275}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3509},"to":{"change":3,"start":3509,"end":3572},"introduced_by":3}],"inode":{"change":3,"pos":15275}},"ins_contents":[{"Add":{"text":" virtual void ErrorEst(int level, TagBoxArray &tags, Real time,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7139"}}],"del_contents":[{"Del":{"text":" virtual void ErrorEst(int lev, TagBoxArray &tags, Real time,","pos":"KG47IF4CPCUT3BHS34WDRHTH5HYMBTY4OSTB3X7APR2E5ZJ32IYQC:3571"}}]}},{"Replacement":{"inode":{"change":3,"pos":15275},"path":"AMReX/src/driver.hxx","line":44,"ins":{"up_context":[{"change":3,"pos":3617}],"down_context":[{"change":3,"pos":3579}],"flag":"BLOCK","start":7141,"end":7222,"inode":{"change":3,"pos":15275}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3617},"to":{"change":3,"start":3500,"end":3579},"introduced_by":3}],"inode":{"change":3,"pos":15275}},"ins_contents":[{"Add":{"text":" virtual void MakeNewLevelFromScratch(int level, Real time, const BoxArray &ba,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7221"}}],"del_contents":[{"Del":{"text":" virtual void MakeNewLevelFromScratch(int lev, Real time, const BoxArray &ba,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3578"}}]}},{"Replacement":{"inode":{"change":3,"pos":15275},"path":"AMReX/src/driver.hxx","line":46,"ins":{"up_context":[{"change":3,"pos":3659}],"down_context":[{"change":3,"pos":3737}],"flag":"BLOCK","start":7223,"end":7303,"inode":{"change":3,"pos":15275}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3659},"to":{"change":3,"start":3659,"end":3737},"introduced_by":3}],"inode":{"change":3,"pos":15275}},"ins_contents":[{"Add":{"text":" virtual void MakeNewLevelFromCoarse(int level, Real time, const BoxArray &ba,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7302"}}],"del_contents":[{"Del":{"text":" virtual void MakeNewLevelFromCoarse(int lev, Real time, const BoxArray &ba,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3736"}}]}},{"Replacement":{"inode":{"change":3,"pos":15275},"path":"AMReX/src/driver.hxx","line":48,"ins":{"up_context":[{"change":3,"pos":3816}],"down_context":[{"change":3,"pos":3883}],"flag":"BLOCK","start":7304,"end":7373,"inode":{"change":3,"pos":15275}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3816},"to":{"change":3,"start":3816,"end":3883},"introduced_by":3}],"inode":{"change":3,"pos":15275}},"ins_contents":[{"Add":{"text":" virtual void RemakeLevel(int level, Real time, const BoxArray &ba,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7372"}}],"del_contents":[{"Del":{"text":" virtual void RemakeLevel(int lev, Real time, const BoxArray &ba,","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3882"}}]}},{"Replacement":{"inode":{"change":3,"pos":15275},"path":"AMReX/src/driver.hxx","line":50,"ins":{"up_context":[{"change":3,"pos":3951}],"down_context":[{"change":3,"pos":3819}],"flag":"BLOCK","start":7374,"end":7421,"inode":{"change":3,"pos":15275}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3951},"to":{"change":3,"start":3951,"end":3996},"introduced_by":3}],"inode":{"change":3,"pos":15275}},"ins_contents":[{"Add":{"text":" virtual void ClearLevel(int level) override;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7420"}}],"del_contents":[{"Del":{"text":" virtual void ClearLevel(int lev) override;","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:3995"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":40,"atom":{"EdgeMap":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":4207},"to":{"change":3,"start":1181,"end":1182},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1181},"to":{"change":3,"start":1181,"end":1182},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1182},"to":{"change":3,"start":4424,"end":4579},"introduced_by":3}],"inode":{"change":3,"pos":531}}},"contents":[{"Del":{"text":"","pos":"BVR7DVINVPQG7PA6Z7QYVYNQ43YZL7XCC6AOMSMWMGAAB2Q43STAC:1181"}},{"Del":{"text":"// During initialization, the schedule should traverse only a single","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4492"}},{"Del":{"text":"// level. At all other times, all levels should be traversed.","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4554"}},{"Del":{"text":"int current_level = -1;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:4578"}}]}},{"Replacement":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":341,"ins":{"up_context":[{"change":3,"pos":5101}],"down_context":[{"change":3,"pos":5154}],"flag":"BLOCK","start":7422,"end":7634,"inode":{"change":3,"pos":531}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5101},"to":{"change":3,"start":5111,"end":5164},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5164},"to":{"change":3,"start":10134,"end":10195},"introduced_by":3}],"inode":{"change":3,"pos":531}},"ins_contents":[{"Add":{"text":" // TODO: Remove \"current_level\" mechanism","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7469"}},{"Add":{"text":" // current_level = ghext->amrcore->finestLevel();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7525"}},{"Add":{"text":" const int level = ghext->amrcore->finestLevel();","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7580"}},{"Add":{"text":" CCTK_VINFO(\"Initializing level %d...\", level);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7633"}}],"del_contents":[{"Del":{"text":" current_level = ghext->amrcore->finestLevel();","pos":"TVBD244E7Q7WV44CRBTFST535NUP3JAZH6OLL4IKDR3OWEXSU7HAC:5163"}},{"Del":{"text":" CCTK_VINFO(\"Initializing level %d...\", current_level);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:10194"}}]}},{"Replacement":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":352,"ins":{"up_context":[{"change":3,"pos":5232}],"down_context":[{"change":3,"pos":5233}],"flag":"BLOCK","start":7635,"end":7671,"inode":{"change":3,"pos":531}},"del":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":5232},"to":{"change":3,"start":5416,"end":5460},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5416},"to":{"change":3,"start":5416,"end":5460},"introduced_by":3}],"inode":{"change":3,"pos":531}},"ins_contents":[{"Add":{"text":" CreateRefinedGrid(level + 1);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7670"}}],"del_contents":[{"Del":{"text":" CreateRefinedGrid(current_level + 1);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:5459"}}]}},{"Replacement":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":361,"ins":{"up_context":[{"change":3,"pos":6039}],"down_context":[{"change":3,"pos":3118}],"flag":"BLOCK","start":7672,"end":7699,"inode":{"change":3,"pos":531}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":6039},"to":{"change":3,"start":6039,"end":6063},"introduced_by":3}],"inode":{"change":3,"pos":531}},"ins_contents":[{"Add":{"text":" // current_level = -1;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7698"}}],"del_contents":[{"Del":{"text":" current_level = -1;","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6062"}}]}},{"Replacement":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":366,"ins":{"up_context":[{"change":3,"pos":176}],"down_context":[{"change":3,"pos":247}],"flag":"BLOCK","start":7700,"end":7774,"inode":{"change":3,"pos":531}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":176},"to":{"change":3,"start":176,"end":247},"introduced_by":3}],"inode":{"change":3,"pos":531}},"ins_contents":[{"Add":{"text":" for (int level = int(ghext->leveldata.size()) - 2; level >= 0; --level)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7773"}}],"del_contents":[{"Del":{"text":" for (int level = (ghext->leveldata.size()) - 2; level >= 0; --level)","pos":"TOBGHRPKEPSXDN56WGSZNWOMCBVJ4KUSLWYWI56MC2RR3MM3KLZAC:246"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":445,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":5362}],"down_context":[{"change":3,"pos":5362}],"flag":"BLOCK","start":7775,"end":7803,"inode":{"change":3,"pos":531}}},"contents":[{"Add":{"text":" DECLARE_CCTK_PARAMETERS;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7801"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7802"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":454,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":5482}],"down_context":[{"change":3,"pos":5566}],"flag":"BLOCK","start":7804,"end":8282,"inode":{"change":3,"pos":531}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7804"}},{"Add":{"text":" if (regrid_every > 0 && cctkGH->cctk_iteration % regrid_every == 0) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7878"}},{"Add":{"text":" CCTK_VINFO(\"Regridding...\");","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7913"}},{"Add":{"text":" CCTK_REAL time = 0.0; // dummy time","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:7955"}},{"Add":{"text":" const int old_numlevels = ghext->amrcore->finestLevel() + 1;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8022"}},{"Add":{"text":" ghext->amrcore->regrid(0, time);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8061"}},{"Add":{"text":" const int new_numlevels = ghext->amrcore->finestLevel() + 1;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8128"}},{"Add":{"text":" CCTK_VINFO(\" old levels %d, new levels %d\", old_numlevels,","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8194"}},{"Add":{"text":" new_numlevels);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8227"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8228"}},{"Add":{"text":" CCTK_Traverse(cctkGH, \"CCTK_BASEGRID\");","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8274"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8280"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8281"}}]}},{"Replacement":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":536,"ins":{"up_context":[{"change":3,"pos":6173}],"down_context":[{"change":3,"pos":6486}],"flag":"BLOCK","start":8283,"end":8406,"inode":{"change":3,"pos":531}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":6173},"to":{"change":3,"start":6173,"end":6486},"introduced_by":3}],"inode":{"change":3,"pos":531}},"ins_contents":[{"Add":{"text":" // Loop over all levels","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8312"}},{"Add":{"text":" // TODO: parallelize this loop","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8349"}},{"Add":{"text":" for (auto &restrict leveldata : ghext->leveldata)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8405"}}],"del_contents":[{"Del":{"text":" if (current_level < 0) {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6203"}},{"Del":{"text":" // Loop over all levels","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6235"}},{"Del":{"text":" // TODO: parallelize this loop","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6274"}},{"Del":{"text":" for (auto &restrict leveldata : ghext->leveldata)","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6332"}},{"Del":{"text":" callfunc(leveldata);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6363"}},{"Del":{"text":" } else {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6378"}},{"Del":{"text":" // Loop over a single level","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6414"}},{"Del":{"text":" auto &restrict leveldata = ghext->leveldata.at(current_level);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6485"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":540,"atom":{"EdgeMap":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":6515},"to":{"change":3,"start":2391,"end":2399},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3097},"to":{"change":3,"start":2391,"end":2399},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":3991},"to":{"change":3,"start":2391,"end":2399},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2391},"to":{"change":3,"start":2391,"end":2399},"introduced_by":3}],"inode":{"change":3,"pos":531}}},"contents":[{"Del":{"text":" }","pos":"PQB3EKQ6MBCXPTW4HB7SGMSTOTYMB3EFZX2573OFCQI6PSOEKCSQC:2398"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":596,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1187},"to":{"change":3,"start":10958,"end":10990},"introduced_by":3}],"inode":{"change":3,"pos":531}}},"contents":[{"Del":{"text":" // CellBilinear interp;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:10989"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":601,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":11038},"to":{"change":3,"start":11038,"end":11339},"introduced_by":3}],"inode":{"change":3,"pos":531}}},"contents":[{"Del":{"text":" // InterpFromCoarseLevel(","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11073"}},{"Del":{"text":" // *groupdata.mfab.at(tl), 0.0, *coarsegroupdata.mfab.at(tl), 0,","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11152"}},{"Del":{"text":" // 0, groupdata.numvars, ghext->amrcore->Geom(level - 1),","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11224"}},{"Del":{"text":" // ghext->amrcore->Geom(level), cphysbc, 0, fphysbc, 0, reffact,","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11303"}},{"Del":{"text":" // &interp, bcs, 0);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11338"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":616,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":456}],"down_context":[{"change":3,"pos":456}],"flag":"BLOCK","start":8407,"end":8624,"inode":{"change":3,"pos":531}}},"contents":[{"Add":{"text":" const int gi_regrid_error = CCTK_GroupIndex(\"AMReX::regrid_error\");","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8476"}},{"Add":{"text":" assert(gi_regrid_error >= 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8508"}},{"Add":{"text":" const int gi_refinement_level = CCTK_GroupIndex(\"AMReX::refinement_level\");","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8586"}},{"Add":{"text":" assert(gi_refinement_level >= 0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8622"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8623"}}]}},{"Edit":{"inode":{"change":3,"pos":531},"path":"AMReX/src/schedule.cxx","line":624,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":631}],"down_context":[{"change":3,"pos":631}],"flag":"BLOCK","start":8625,"end":8769,"inode":{"change":3,"pos":531}}},"contents":[{"Add":{"text":" // Don't restrict the regridding error nor the refinement level","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8692"}},{"Add":{"text":" if (gi == gi_regrid_error || gi == gi_refinement_level)","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8752"}},{"Add":{"text":" continue;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8768"}}]}},{"Edit":{"inode":{"change":3,"pos":14802},"path":"WaveToyAMReX/README","line":14,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":11872},"to":{"change":3,"start":11872,"end":12111},"introduced_by":3}],"inode":{"change":3,"pos":14802}}},"contents":[{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11872"}},{"Del":{"text":"Scalar wave equation:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11894"}},{"Del":{"text":" phi,tt = phi,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11912"}},{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11913"}},{"Del":{"text":"Introduce new variable:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11937"}},{"Del":{"text":" psi = phi,t","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11951"}},{"Del":{"text":"New set of equations:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11973"}},{"Del":{"text":" phi,t = psi","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:11987"}},{"Del":{"text":" psi,t = phi,tt = phi,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12013"}},{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12014"}},{"Del":{"text":"Discretization:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12030"}},{"Del":{"text":" phi_0 = phi_1 + dt psi_1","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12057"}},{"Del":{"text":" psi_0 = psi_1 + dt phi_1,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12087"}},{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12088"}},{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12089"}},{"Del":{"text":"","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12090"}},{"Del":{"text":"3. Fancy equations:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12110"}}]}},{"Replacement":{"inode":{"change":3,"pos":14802},"path":"WaveToyAMReX/README","line":21,"ins":{"up_context":[{"change":3,"pos":12255}],"down_context":[{"change":3,"pos":12390}],"flag":"BLOCK","start":8770,"end":8801,"inode":{"change":3,"pos":14802}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12255},"to":{"change":3,"start":12255,"end":12390},"introduced_by":3}],"inode":{"change":3,"pos":14802}},"ins_contents":[{"Add":{"text":" psi_0 = (phi_0 - phi_1) / dt","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8800"}}],"del_contents":[{"Del":{"text":" psi = phi,t","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12268"}},{"Del":{"text":"New set of equations:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12290"}},{"Del":{"text":" phi,t = psi","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12304"}},{"Del":{"text":" psi,t = phi,tt = phi,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12330"}},{"Del":{"text":"New, equivalent discretization:","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12362"}},{"Del":{"text":" phi_0 - phi_1 = dt psi_1","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12389"}}]}},{"Replacement":{"inode":{"change":3,"pos":14802},"path":"WaveToyAMReX/README","line":23,"ins":{"up_context":[{"change":3,"pos":12391}],"down_context":[{"change":3,"pos":12503}],"flag":"BLOCK","start":8802,"end":8942,"inode":{"change":3,"pos":14802}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12391},"to":{"change":3,"start":12391,"end":12503},"introduced_by":3}],"inode":{"change":3,"pos":14802}},"ins_contents":[{"Add":{"text":"Some calculations:","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8820"}},{"Add":{"text":" psi_1 = (phi_1 - phi_2) / dt","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8851"}},{"Add":{"text":" phi_0 = 2 phi_1 - phi_2 + dt^2 phi_1,xx","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8893"}},{"Add":{"text":" phi_0 = phi_1 + phi_1 - phi_2 + dt^2 phi_1,xx","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8941"}}],"del_contents":[{"Del":{"text":" phi_0 - 2 phi_1 + phi_2 = dt^2 phi_1,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12432"}},{"Del":{"text":" dt psi_1 - dt psi_2 = dt^2 phi_1,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12470"}},{"Del":{"text":" psi_1 = psi_2 + dt^2 phi_1,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12502"}}]}},{"Replacement":{"inode":{"change":3,"pos":14802},"path":"WaveToyAMReX/README","line":28,"ins":{"up_context":[{"change":3,"pos":12504}],"down_context":[],"flag":"BLOCK","start":8943,"end":9097,"inode":{"change":3,"pos":14802}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12504},"to":{"change":3,"start":12504,"end":12607},"introduced_by":3}],"inode":{"change":3,"pos":14802}},"ins_contents":[{"Add":{"text":" phi_0 = phi_1 + dt psi_1 + dt^2 phi_1,xx","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:8985"}},{"Add":{"text":" psi_0 = (phi_0 - phi_1) / dt","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9016"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9017"}},{"Add":{"text":"New set of equations:","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9039"}},{"Add":{"text":" psi_0 = psi_1 + dt phi_1,xx","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9069"}},{"Add":{"text":" phi_0 = phi_1 + dt psi_0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9096"}}],"del_contents":[{"Del":{"text":" phi_0 = phi_1 + dt psi_1","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12530"}},{"Del":{"text":" psi_0 = psi_1 + dt phi_0,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12560"}},{"Del":{"text":" = psi_1 + dt phi_1,xx + dt^2 psi_1,xx","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12606"}}]}},{"Replacement":{"inode":{"change":3,"pos":10196},"path":"WaveToyAMReX/interface.ccl","line":9,"ins":{"up_context":[{"change":3,"pos":1526}],"down_context":[{"change":3,"pos":6908}],"flag":"BLOCK","start":9098,"end":9133,"inode":{"change":3,"pos":10196}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1526},"to":{"change":3,"start":6873,"end":6908},"introduced_by":3}],"inode":{"change":3,"pos":10196}},"ins_contents":[{"Add":{"text":"CCTK_REAL phi TYPE=gf TIMELEVELS=2","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9132"}}],"del_contents":[{"Del":{"text":"CCTK_REAL phi TYPE=gf TIMELEVELS=3","pos":"UUGQGVC4WEKN64WAP7F5QPS2UHGQB5ZLMFRIYNWKMIEBDO3QRX4AC:6907"}}]}},{"Replacement":{"inode":{"change":3,"pos":10196},"path":"WaveToyAMReX/interface.ccl","line":12,"ins":{"up_context":[{"change":3,"pos":6916}],"down_context":[{"change":3,"pos":6916}],"flag":"BLOCK","start":9134,"end":9140,"inode":{"change":3,"pos":10196}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":6916},"to":{"change":3,"start":12608,"end":12616},"introduced_by":3}],"inode":{"change":3,"pos":10196}},"ins_contents":[{"Add":{"text":" psi","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9139"}}],"del_contents":[{"Del":{"text":" # psi","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12615"}}]}},{"Replacement":{"inode":{"change":3,"pos":10196},"path":"WaveToyAMReX/interface.ccl","line":23,"ins":{"up_context":[{"change":3,"pos":12698}],"down_context":[],"flag":"BLOCK","start":9141,"end":9186,"inode":{"change":3,"pos":10196}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12698},"to":{"change":3,"start":12698,"end":12709},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":12709},"to":{"change":3,"start":6979,"end":7027},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2036},"to":{"change":3,"start":6979,"end":7027},"introduced_by":3}],"inode":{"change":3,"pos":10196}},"ins_contents":[{"Add":{"text":" psierr","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9149"}},{"Add":{"text":"} \"Error of wave equation solution\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9185"}}],"del_contents":[{"Del":{"text":" # psierr","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:12708"}},{"Del":{"text":"} \"Error in scalar potential for wave equation\"","pos":"UUGQGVC4WEKN64WAP7F5QPS2UHGQB5ZLMFRIYNWKMIEBDO3QRX4AC:7026"}}]}},{"Edit":{"inode":{"change":3,"pos":10131},"path":"WaveToyAMReX/param.ccl","line":2,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":10179}],"down_context":[],"flag":"BLOCK","start":9187,"end":9679,"inode":{"change":3,"pos":10131}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9187"}},{"Add":{"text":"KEYWORD initial_condition \"Initial condition\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9233"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9235"}},{"Add":{"text":" \"standing wave\" :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9259"}},{"Add":{"text":" \"periodic Gaussian\" :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9287"}},{"Add":{"text":"} \"standing wave\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9305"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9306"}},{"Add":{"text":"CCTK_REAL spatial_frequency_x \"spatial frequency\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9356"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9358"}},{"Add":{"text":" *:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9370"}},{"Add":{"text":"} 0.5","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9376"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9377"}},{"Add":{"text":"CCTK_REAL spatial_frequency_y \"spatial frequency\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9427"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9429"}},{"Add":{"text":" *:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9441"}},{"Add":{"text":"} 0.5","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9447"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9448"}},{"Add":{"text":"CCTK_REAL spatial_frequency_z \"spatial frequency\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9498"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9500"}},{"Add":{"text":" *:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9512"}},{"Add":{"text":"} 0.5","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9518"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9519"}},{"Add":{"text":"CCTK_REAL width \"width\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9543"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9545"}},{"Add":{"text":" (0.0:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9560"}},{"Add":{"text":"} 0.1","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9566"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9567"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9568"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9569"}},{"Add":{"text":"CCTK_REAL phi_abs \"Typical value of phi to determine absolute error\" STEERABLE=always","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9655"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9657"}},{"Add":{"text":" (0.0:* :: \"\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9672"}},{"Add":{"text":"} 1.0","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9678"}}]}},{"Replacement":{"inode":{"change":3,"pos":9594},"path":"WaveToyAMReX/schedule.ccl","line":9,"ins":{"up_context":[{"change":3,"pos":1890}],"down_context":[{"change":3,"pos":6575}],"flag":"BLOCK","start":9680,"end":9731,"inode":{"change":3,"pos":9594}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":1890},"to":{"change":3,"start":6534,"end":6575},"introduced_by":3}],"inode":{"change":3,"pos":9594}},"ins_contents":[{"Add":{"text":"SCHEDULE WaveToyAMReX_EstimateError AT postinitial","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9730"}}],"del_contents":[{"Del":{"text":"SCHEDULE WaveToyAMReX_Tag AT postinitial","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6574"}}]}},{"Replacement":{"inode":{"change":3,"pos":9594},"path":"WaveToyAMReX/schedule.ccl","line":12,"ins":{"up_context":[{"change":3,"pos":6587}],"down_context":[{"change":3,"pos":6617}],"flag":"BLOCK","start":9732,"end":9791,"inode":{"change":3,"pos":9594}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":6587},"to":{"change":3,"start":6587,"end":6617},"introduced_by":3}],"inode":{"change":3,"pos":9594}},"ins_contents":[{"Add":{"text":"} \"Estimate local error for regridding initial conditions\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9790"}}],"del_contents":[{"Del":{"text":"} \"Tag to-be-refined regions\"","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6616"}}]}},{"Edit":{"inode":{"change":3,"pos":9594},"path":"WaveToyAMReX/schedule.ccl","line":20,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":12711}],"down_context":[{"change":3,"pos":12711}],"flag":"BLOCK","start":9792,"end":9910,"inode":{"change":3,"pos":9594}}},"contents":[{"Add":{"text":"SCHEDULE WaveToyAMReX_EstimateError AT poststep","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9839"}},{"Add":{"text":"{","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9841"}},{"Add":{"text":" LANG: C","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9851"}},{"Add":{"text":"} \"Estimate local error for regridding during evolution\"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9908"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9909"}}]}},{"Edit":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":5,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":215}],"down_context":[{"change":3,"pos":233}],"flag":"BLOCK","start":9911,"end":9930,"inode":{"change":3,"pos":37}}},"contents":[{"Add":{"text":"#include ","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9929"}}]}},{"Edit":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":25,"atom":{"EdgeMap":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":12977},"to":{"change":3,"start":12977,"end":13034},"introduced_by":3}],"inode":{"change":3,"pos":37}}},"contents":[{"Del":{"text":" // return (f(t + dt, x, y, z) - f(t, x, y, z)) / dt;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13033"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":31,"ins":{"up_context":[{"change":3,"pos":632}],"down_context":[{"change":3,"pos":724}],"flag":"BLOCK","start":9931,"end":10081,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":632},"to":{"change":3,"start":13096,"end":13199},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" DECLARE_CCTK_PARAMETERS;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9957"}},{"Add":{"text":" T kx = 2 * M_PI * spatial_frequency_x;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:9998"}},{"Add":{"text":" T ky = 2 * M_PI * spatial_frequency_y;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10039"}},{"Add":{"text":" T kz = 2 * M_PI * spatial_frequency_z;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10080"}}],"del_contents":[{"Del":{"text":" T kx = 2 * M_PI / 2, ky = 2 * M_PI / 2, kz = 2 * M_PI / 2;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13156"}},{"Del":{"text":" // T kx = 2 * M_PI / 2, ky = 0, kz = 0;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13198"}}]}},{"Edit":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":39,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":2035}],"down_context":[{"change":3,"pos":2035}],"flag":"BLOCK","start":10082,"end":10419,"inode":{"change":3,"pos":37}}},"contents":[{"Add":{"text":"// Standing wave","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10098"}},{"Add":{"text":"template T gaussian(T t, T x, T y, T z) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10153"}},{"Add":{"text":" DECLARE_CCTK_PARAMETERS;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10180"}},{"Add":{"text":" T kx = M_PI * spatial_frequency_x;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10217"}},{"Add":{"text":" T ky = M_PI * spatial_frequency_y;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10254"}},{"Add":{"text":" T kz = M_PI * spatial_frequency_z;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10291"}},{"Add":{"text":" T omega = sqrt(sqr(kx) + sqr(ky) + sqr(kz));","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10338"}},{"Add":{"text":" return exp(-0.5 * sqr(sin(kx * x + ky * y + kz * z - omega * t) / width));","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10415"}},{"Add":{"text":"}","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10417"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10418"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":69,"ins":{"up_context":[{"change":3,"pos":13403}],"down_context":[{"change":3,"pos":4979}],"flag":"BLOCK","start":10420,"end":10572,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":13403},"to":{"change":3,"start":13403,"end":13493},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" if (CCTK_EQUALS(initial_condition, \"standing wave\")) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10476"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10477"}},{"Add":{"text":" for (int k = imin[2]; k < imax[2]; ++k) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10523"}},{"Add":{"text":" for (int j = imin[1]; j < imax[1]; ++j) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10571"}}],"del_contents":[{"Del":{"text":" for (int k = imin[2]; k < imax[2]; ++k) {","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13446"}},{"Del":{"text":" for (int j = imin[1]; j < imax[1]; ++j) {","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13492"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":74,"ins":{"up_context":[{"change":3,"pos":4996}],"down_context":[{"change":3,"pos":3756}],"flag":"BLOCK","start":10573,"end":11674,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":4996},"to":{"change":3,"start":13494,"end":13542},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":13542},"to":{"change":3,"start":2959,"end":3279},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2959},"to":{"change":3,"start":2959,"end":3279},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3279},"to":{"change":3,"start":13543,"end":13602},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" for (int i = imin[0]; i < imax[0]; ++i) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10622"}},{"Add":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10681"}},{"Add":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10741"}},{"Add":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10801"}},{"Add":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10861"}},{"Add":{"text":" phi[idx] = standing(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10904"}},{"Add":{"text":" // phi_p[idx] = standing(t - dt, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:10957"}},{"Add":{"text":" psi[idx] = timederiv(standing, dt)(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11015"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11025"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11033"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11039"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11040"}},{"Add":{"text":" } else if (CCTK_EQUALS(initial_condition, \"periodic Gaussian\")) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11108"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11109"}},{"Add":{"text":" for (int k = imin[2]; k < imax[2]; ++k) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11155"}},{"Add":{"text":" for (int j = imin[1]; j < imax[1]; ++j) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11203"}},{"Add":{"text":"#pragma omp simd","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11220"}},{"Add":{"text":" for (int i = imin[0]; i < imax[0]; ++i) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11270"}},{"Add":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11329"}},{"Add":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11389"}},{"Add":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11449"}},{"Add":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11509"}},{"Add":{"text":" phi[idx] = gaussian(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11552"}},{"Add":{"text":" // phi_p[idx] = gaussian(t - dt, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11605"}},{"Add":{"text":" psi[idx] = timederiv(gaussian, dt)(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11663"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11673"}}],"del_contents":[{"Del":{"text":" for (int i = imin[0]; i < imax[0]; ++i) {","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13541"}},{"Del":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3015"}},{"Del":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3073"}},{"Del":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3131"}},{"Del":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3189"}},{"Del":{"text":" phi[idx] = standing(t, x, y, z);","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3230"}},{"Del":{"text":" phi_p[idx] = standing(t - dt, x, y, z);","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3278"}},{"Del":{"text":" // psi[idx] = timederiv(standing, dt)(t, x, y, z);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13601"}}]}},{"Edit":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":102,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":2614}],"down_context":[{"change":3,"pos":2614}],"flag":"BLOCK","start":11675,"end":11702,"inode":{"change":3,"pos":37}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11675"}},{"Add":{"text":" } else {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11686"}},{"Add":{"text":" assert(0);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11701"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":108,"ins":{"up_context":[{"change":3,"pos":6620}],"down_context":[{"change":3,"pos":6671}],"flag":"BLOCK","start":11703,"end":11764,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":6620},"to":{"change":3,"start":6620,"end":6671},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":"extern \"C\" void WaveToyAMReX_EstimateError(CCTK_ARGUMENTS) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11763"}}],"del_contents":[{"Del":{"text":"extern \"C\" void WaveToyAMReX_Tag(CCTK_ARGUMENTS) {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6670"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":112,"ins":{"up_context":[{"change":3,"pos":5452}],"down_context":[{"change":3,"pos":6860}],"flag":"BLOCK","start":11765,"end":11859,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5452},"to":{"change":3,"start":6725,"end":6860},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" constexpr int di = 1;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11788"}},{"Add":{"text":" const int dj = di * cctk_ash[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11823"}},{"Add":{"text":" const int dk = dj * cctk_ash[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11858"}}],"del_contents":[{"Del":{"text":" CCTK_REAL x0[dim], dx[dim];","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6754"}},{"Del":{"text":" for (int d = 0; d < dim; ++d) {","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6788"}},{"Del":{"text":" x0[d] = CCTK_ORIGIN_SPACE(d);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6822"}},{"Del":{"text":" dx[d] = CCTK_DELTA_SPACE(d);","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6855"}},{"Del":{"text":" }","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:6859"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":121,"ins":{"up_context":[{"change":3,"pos":7067}],"down_context":[{"change":3,"pos":7324}],"flag":"BLOCK","start":11860,"end":12293,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":7067},"to":{"change":3,"start":7067,"end":7295},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":7295},"to":{"change":3,"start":13603,"end":13637},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":13637},"to":{"change":3,"start":1267,"end":1327},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":7295},"to":{"change":3,"start":1267,"end":1327},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" CCTK_REAL base_phi = fabs(phi[idx]) + fabs(phi_abs);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11920"}},{"Add":{"text":" CCTK_REAL errx_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:11949"}},{"Add":{"text":" fabs(phi[idx - di] - 2 * phi[idx] + phi[idx + di]) / base_phi;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12024"}},{"Add":{"text":" CCTK_REAL erry_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12053"}},{"Add":{"text":" fabs(phi[idx - dj] - 2 * phi[idx] + phi[idx + dj]) / base_phi;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12128"}},{"Add":{"text":" CCTK_REAL errz_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12157"}},{"Add":{"text":" fabs(phi[idx - dk] - 2 * phi[idx] + phi[idx + dk]) / base_phi;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12232"}},{"Add":{"text":" regrid_error[idx] = errx_phi + erry_phi + errz_phi;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12292"}}],"del_contents":[{"Del":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:7124"}},{"Del":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:7182"}},{"Del":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:7240"}},{"Del":{"text":" CCTK_REAL r = sqrt(sqr(x) + sqr(y) + sqr(z));","pos":"MSBBCXVGD3GRLE5KAI6BKAFRV7SQUWI2SNN43AJAUD3ISRCEXY6QC:7294"}},{"Del":{"text":" // CCTK_REAL r = fabs(x);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:13636"}},{"Del":{"text":" tag[idx] = r <= 0.5 / cctk_levfac[0] - 0.5 * dx[0];","pos":"TOBGHRPKEPSXDN56WGSZNWOMCBVJ4KUSLWYWI56MC2RR3MM3KLZAC:1326"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":165,"ins":{"up_context":[{"change":3,"pos":5321}],"down_context":[{"change":3,"pos":14728}],"flag":"BLOCK","start":12294,"end":12526,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5321},"to":{"change":3,"start":13982,"end":14727},"introduced_by":3},{"previous":"","flag":"DELETED","from":{"change":3,"pos":14727},"to":{"change":3,"start":5373,"end":5433},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":5373},"to":{"change":3,"start":5373,"end":5433},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" // phi[idx] = 2 * phi_p[idx] - phi_p_p[idx] +","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12347"}},{"Add":{"text":" // sqr(dt) * (ddx_phi + ddy_phi + ddz_phi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12410"}},{"Add":{"text":" psi[idx] = psi_p[idx] + dt * (ddx_phi + ddy_phi + ddz_phi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12478"}},{"Add":{"text":" phi[idx] = phi_p[idx] + dt * psi[idx];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12525"}}],"del_contents":[{"Del":{"text":" // CCTK_REAL ddx_psi =","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14012"}},{"Del":{"text":" // (psi_p[idx - di] - 2 * psi_p[idx] + psi_p[idx + di]) /","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14082"}},{"Del":{"text":" // sqr(dx[0]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14109"}},{"Del":{"text":" // CCTK_REAL ddy_psi =","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14140"}},{"Del":{"text":" // (psi_p[idx - dj] - 2 * psi_p[idx] + psi_p[idx + dj]) /","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14210"}},{"Del":{"text":" // sqr(dx[1]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14237"}},{"Del":{"text":" // CCTK_REAL ddz_psi =","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14268"}},{"Del":{"text":" // (psi_p[idx - dk] - 2 * psi_p[idx] + psi_p[idx + dk]) /","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14338"}},{"Del":{"text":" // sqr(dx[2]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14365"}},{"Del":{"text":" // phi[idx] = phi_p[idx] + dt * psi_p[idx];","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14417"}},{"Del":{"text":" // psi[idx] = psi_p[idx] + dt * (ddx_phi + ddy_phi + ddz_phi) +","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14489"}},{"Del":{"text":" // sqr(dt) * (ddx_psi + ddy_psi + ddz_psi);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14552"}},{"Del":{"text":" // phi[idx] = phi_p[idx] + dt * psi_p[idx];","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14604"}},{"Del":{"text":" // psi[idx] = psi_p[idx] + dt * (ddx_phi + ddy_phi + ddz_phi);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14675"}},{"Del":{"text":" phi[idx] = 2 * phi_p[idx] - phi_p_p[idx] +","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:14726"}},{"Del":{"text":" sqr(dt) * (ddx_phi + ddy_phi + ddz_phi);","pos":"ORAAQXS3UNKXYDJBCTHNEIDJIZDHWMM5EVCZKVMFRKQK2NIQNJGAC:5432"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":198,"ins":{"up_context":[{"change":3,"pos":15494}],"down_context":[{"change":3,"pos":5433}],"flag":"BLOCK","start":12527,"end":13559,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":15494},"to":{"change":3,"start":15494,"end":15853},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" CCTK_REAL ddx_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12554"}},{"Add":{"text":" (phi[idx - di] - 2 * phi[idx] + phi[idx + di]) / sqr(dx[0]);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12627"}},{"Add":{"text":" CCTK_REAL ddy_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12655"}},{"Add":{"text":" (phi[idx - dj] - 2 * phi[idx] + phi[idx + dj]) / sqr(dx[1]);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12728"}},{"Add":{"text":" CCTK_REAL ddz_phi =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12756"}},{"Add":{"text":" (phi[idx - dk] - 2 * phi[idx] + phi[idx + dk]) / sqr(dx[2]);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12829"}},{"Add":{"text":" CCTK_REAL psi_n = psi[idx] + dt * (ddx_phi + ddy_phi + ddz_phi);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12902"}},{"Add":{"text":" CCTK_REAL dt_phi_p = psi_n;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12938"}},{"Add":{"text":" CCTK_REAL dt_phi_m = psi_p[idx];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:12979"}},{"Add":{"text":" CCTK_REAL dx_phi_p = (phi[idx + di] - phi[idx]) / dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13044"}},{"Add":{"text":" CCTK_REAL dx_phi_m = (phi[idx] - phi[idx - di]) / dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13109"}},{"Add":{"text":" CCTK_REAL dy_phi_p = (phi[idx + dj] - phi[idx]) / dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13174"}},{"Add":{"text":" CCTK_REAL dy_phi_m = (phi[idx] - phi[idx - dj]) / dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13239"}},{"Add":{"text":" CCTK_REAL dz_phi_p = (phi[idx + dk] - phi[idx]) / dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13304"}},{"Add":{"text":" CCTK_REAL dz_phi_m = (phi[idx] - phi[idx - dk]) / dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13369"}},{"Add":{"text":" eps[idx] =","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13388"}},{"Add":{"text":" (sqr(dt_phi_p) + sqr(dt_phi_m) + sqr(dx_phi_p) + sqr(dx_phi_m) +","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13465"}},{"Add":{"text":" sqr(dy_phi_p) + sqr(dy_phi_m) + sqr(dz_phi_p) + sqr(dz_phi_m)) /","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13543"}},{"Add":{"text":" 4;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13558"}}],"del_contents":[{"Del":{"text":" CCTK_REAL dt_phi = (phi[idx] - phi_p[idx]) / dt;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15550"}},{"Del":{"text":" CCTK_REAL dx_phi = (phi[idx + di] - phi[idx - di]) / (2 * dx[0]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15624"}},{"Del":{"text":" CCTK_REAL dy_phi = (phi[idx + dj] - phi[idx - dj]) / (2 * dx[1]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15698"}},{"Del":{"text":" CCTK_REAL dz_phi = (phi[idx + dk] - phi[idx - dk]) / (2 * dx[2]);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15772"}},{"Del":{"text":" eps[idx] = (sqr(dt_phi) + sqr(dx_phi) + sqr(dy_phi) + sqr(dz_phi)) / 2;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15852"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":227,"ins":{"up_context":[{"change":3,"pos":3664}],"down_context":[{"change":3,"pos":6580}],"flag":"BLOCK","start":13560,"end":13600,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":3664},"to":{"change":3,"start":15854,"end":15897},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" const CCTK_REAL dt = CCTK_DELTA_TIME;","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13599"}}],"del_contents":[{"Del":{"text":" // const CCTK_REAL dt = CCTK_DELTA_TIME;","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15896"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":234,"ins":{"up_context":[{"change":3,"pos":7715}],"down_context":[{"change":3,"pos":8503}],"flag":"BLOCK","start":13601,"end":13749,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":7715},"to":{"change":3,"start":2717,"end":2803},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" if (CCTK_EQUALS(initial_condition, \"standing wave\")) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13657"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13658"}},{"Add":{"text":" for (int k = 0; k < cctk_lsh[2]; ++k) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13702"}},{"Add":{"text":" for (int j = 0; j < cctk_lsh[1]; ++j) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13748"}}],"del_contents":[{"Del":{"text":" for (int k = 0; k < cctk_lsh[2]; ++k) {","pos":"UZAKARMGORRQG733ZUPJOEGL5FG243I32NCC2SRSFDCZKUQ5A52QC:2758"}},{"Del":{"text":" for (int j = 0; j < cctk_lsh[1]; ++j) {","pos":"UZAKARMGORRQG733ZUPJOEGL5FG243I32NCC2SRSFDCZKUQ5A52QC:2802"}}]}},{"Replacement":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":239,"ins":{"up_context":[{"change":3,"pos":8520}],"down_context":[{"change":3,"pos":6606}],"flag":"BLOCK","start":13750,"end":14176,"inode":{"change":3,"pos":37}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":8520},"to":{"change":3,"start":3863,"end":4140},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":4140},"to":{"change":3,"start":15898,"end":16026},"introduced_by":3}],"inode":{"change":3,"pos":37}},"ins_contents":[{"Add":{"text":" for (int i = 0; i < cctk_lsh[0]; ++i) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13797"}},{"Add":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13856"}},{"Add":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13916"}},{"Add":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:13976"}},{"Add":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14036"}},{"Add":{"text":" phierr[idx] = phi[idx] - standing(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14093"}},{"Add":{"text":" psierr[idx] = psi[idx] - timederiv(standing, dt)(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14165"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14175"}}],"del_contents":[{"Del":{"text":" for (int i = 0; i < cctk_lsh[0]; ++i) {","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3908"}},{"Del":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:3965"}},{"Del":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:4023"}},{"Del":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:4081"}},{"Del":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"AEVGZIZEUIC52MCK3J4V547YEV2R4YQL3JUJW7FSP4R34PSZ43DAC:4139"}},{"Del":{"text":" phierr[idx] = phi[idx] - standing(t, x, y, z);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:15952"}},{"Del":{"text":" // psierr[idx] = psi[idx] - timederiv(standing, dt)(t, x, y, z);","pos":"2DKSL6DKZAIYQUJGDULORCKU5K4Z5Z3W4RIKQYDSLKMCNQNDZFBAC:16025"}}]}},{"Edit":{"inode":{"change":3,"pos":37},"path":"WaveToyAMReX/src/wavetoy.cxx","line":249,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":2810}],"down_context":[{"change":3,"pos":2810}],"flag":"BLOCK","start":14177,"end":14794,"inode":{"change":3,"pos":37}}},"contents":[{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14177"}},{"Add":{"text":" } else if (CCTK_EQUALS(initial_condition, \"periodic Gaussian\")) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14245"}},{"Add":{"text":"","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14246"}},{"Add":{"text":" for (int k = 0; k < cctk_lsh[2]; ++k) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14290"}},{"Add":{"text":" for (int j = 0; j < cctk_lsh[1]; ++j) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14336"}},{"Add":{"text":"#pragma omp simd","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14353"}},{"Add":{"text":" for (int i = 0; i < cctk_lsh[0]; ++i) {","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14401"}},{"Add":{"text":" const int idx = CCTK_GFINDEX3D(cctkGH, i, j, k);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14460"}},{"Add":{"text":" CCTK_REAL x = x0[0] + (cctk_lbnd[0] + i) * dx[0];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14520"}},{"Add":{"text":" CCTK_REAL y = x0[1] + (cctk_lbnd[1] + j) * dx[1];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14580"}},{"Add":{"text":" CCTK_REAL z = x0[2] + (cctk_lbnd[2] + k) * dx[2];","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14640"}},{"Add":{"text":" phierr[idx] = phi[idx] - gaussian(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14697"}},{"Add":{"text":" psierr[idx] = psi[idx] - timederiv(gaussian, dt)(t, x, y, z);","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14769"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14779"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14787"}},{"Add":{"text":" }","pos":"33IC3UHCEPZLGS5ACS2JXHGT6CRU5LXU6PM6RDHCERPOIELVRVXQC:14793"}}]}}],"owner":"eschnett","repo":"cactusamrex","login":null}

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