{"header":{"message":"CarpetX: Correct bugs in Silo output\n","description":null,"timestamp":"2020-02-20T02:23:01Z","authors":[{"email":"schnetter@gmail.com","name":"Erik Schnetter"}]},"hash":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC","authors":[],"deps":{"hashes":[["6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC","CarpetX: Correct bugs in Silo output\n"],["AA",null],["2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC","Make Silo output work\n"]],"deps":["2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC"],"known":[]},"hunks":[{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":22,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":359}],"down_context":[{"change":2,"pos":359}],"flag":"BLOCK","start":0,"end":19,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"#include ","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":27,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":429}],"down_context":[{"change":2,"pos":429}],"flag":"BLOCK","start":20,"end":39,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"#include ","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:38"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":46,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":872}],"down_context":[{"change":2,"pos":872}],"flag":"BLOCK","start":40,"end":245,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:40"}},{"Add":{"text":"string make_subdirname(const string &simulation_name, const int iteration) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:117"}},{"Add":{"text":" ostringstream buf;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:138"}},{"Add":{"text":" buf << simulation_name //","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:166"}},{"Add":{"text":" << \".it\" << setw(8) << setfill('0') << iteration;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:222"}},{"Add":{"text":" return buf.str();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:242"}},{"Add":{"text":"}","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:244"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":107,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":2455}],"down_context":[{"change":2,"pos":2455}],"flag":"BLOCK","start":246,"end":355,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:246"}},{"Add":{"text":" static Timer timer_setup(\"OutputSilo.setup\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:294"}},{"Add":{"text":" auto interval_setup = make_unique(timer_setup);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:354"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":178,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":4687}],"down_context":[{"change":2,"pos":4687}],"flag":"BLOCK","start":356,"end":385,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:356"}},{"Add":{"text":" interval_setup = nullptr;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:384"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":181,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":4688}],"down_context":[{"change":2,"pos":4688}],"flag":"BLOCK","start":386,"end":491,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" static Timer timer_data(\"OutputSilo.data\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:431"}},{"Add":{"text":" auto interval_data = make_unique(timer_data);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:489"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:490"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":186,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":4708}],"down_context":[{"change":2,"pos":4708}],"flag":"BLOCK","start":492,"end":1154,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" static Timer timer_mkdir(\"OutputSilo.mkdir\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:541"}},{"Add":{"text":" auto interval_mkdir = make_unique(timer_mkdir);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:603"}},{"Add":{"text":" const string subdirname = make_subdirname(simulation_name, cctk_iteration);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:683"}},{"Add":{"text":" const string pathname = string(out_dir) + \"/\" + subdirname;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:747"}},{"Add":{"text":" const int mode = 0755;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:774"}},{"Add":{"text":" static bool did_create_directory = false;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:820"}},{"Add":{"text":" if (!did_create_directory) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:853"}},{"Add":{"text":" ierr = CCTK_CreateDirectory(mode, out_dir);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:903"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:928"}},{"Add":{"text":" did_create_directory = true;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:963"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:969"}},{"Add":{"text":" ierr = CCTK_CreateDirectory(mode, pathname.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1026"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1049"}},{"Add":{"text":" // int dummy = 0;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1071"}},{"Add":{"text":" // MPI_Bcast(&dummy, 1, MPI_INT, 0, mpi_comm);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1122"}},{"Add":{"text":" interval_mkdir = nullptr;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1152"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1153"}}]}},{"Replacement":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":206,"ins":{"up_context":[{"change":2,"pos":4786}],"down_context":[{"change":2,"pos":4820}],"flag":"BLOCK","start":1155,"end":1182,"inode":{"change":2,"pos":38}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":2,"pos":4786},"to":{"change":2,"start":4786,"end":4820},"introduced_by":2}],"inode":{"change":2,"pos":38}},"ins_contents":[{"Add":{"text":" pathname + \"/\" +","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1181"}}],"del_contents":[{"Del":{"text":" string(out_dir) + \"/\" +","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:4819"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":256,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":6675}],"down_context":[{"change":2,"pos":6675}],"flag":"BLOCK","start":1183,"end":1288,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" static Timer timer_mesh(\"OutputSilo.mesh\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1238"}},{"Add":{"text":" Interval interval_mesh(timer_mesh);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1286"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1287"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":324,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":9220}],"down_context":[{"change":2,"pos":9220}],"flag":"BLOCK","start":1289,"end":1405,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" static Timer timer_mpi(\"OutputSilo.mpi\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1340"}},{"Add":{"text":" auto interval_mpi = make_unique(timer_mpi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1404"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":344,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":10044}],"down_context":[{"change":2,"pos":10044}],"flag":"BLOCK","start":1406,"end":1440,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" interval_mpi = nullptr;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1439"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":348,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":10101}],"down_context":[{"change":2,"pos":10101}],"flag":"BLOCK","start":1441,"end":1542,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" static Timer timer_var(\"OutputSilo.var\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1494"}},{"Add":{"text":" Interval interval_var(timer_var);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1540"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1541"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":407,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":12036}],"down_context":[{"change":2,"pos":12036}],"flag":"BLOCK","start":1543,"end":1676,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1543"}},{"Add":{"text":" interval_data = nullptr;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1570"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1571"}},{"Add":{"text":" static Timer timer_meta(\"OutputSilo.meta\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1617"}},{"Add":{"text":" auto interval_meta = make_unique(timer_meta);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1675"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":443,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":13076}],"down_context":[{"change":2,"pos":13076}],"flag":"BLOCK","start":1677,"end":1678,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1677"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":445,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":13130}],"down_context":[{"change":2,"pos":13130}],"flag":"BLOCK","start":1679,"end":4953,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1679"}},{"Add":{"text":" // Count components per level","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1717"}},{"Add":{"text":" const int nlevels = ghext->leveldata.size();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1770"}},{"Add":{"text":" vector ncomps_level;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1804"}},{"Add":{"text":" for (const auto &leveldata : ghext->leveldata) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1861"}},{"Add":{"text":" const auto &groupdata = *leveldata.groupdata.at(gi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1924"}},{"Add":{"text":" const MultiFab &mfab = *groupdata.mfab[tl];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:1978"}},{"Add":{"text":" const DistributionMapping &dm = mfab.DistributionMap();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2044"}},{"Add":{"text":" const int nfabs = dm.size();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2083"}},{"Add":{"text":" ncomps_level.push_back(nfabs);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2124"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2134"}},{"Add":{"text":" vector firstcomp_level;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2171"}},{"Add":{"text":" int ncomps_total = 0;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2201"}},{"Add":{"text":" for (const int ncomps : ncomps_level) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2249"}},{"Add":{"text":" firstcomp_level.push_back(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2300"}},{"Add":{"text":" ncomps_total += ncomps;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2334"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2344"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2345"}},{"Add":{"text":" // Describe which components belong to which level","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2404"}},{"Add":{"text":" // Question: Can this name be changed?","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2451"}},{"Add":{"text":" const string levelmaps_name = multimeshname + \"_wmrgtree_lvlMaps\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2526"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2536"}},{"Add":{"text":" vector segment_types;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2573"}},{"Add":{"text":" vector > segment_data;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2618"}},{"Add":{"text":" segment_types.reserve(nlevels);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2660"}},{"Add":{"text":" segment_data.reserve(nlevels);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2701"}},{"Add":{"text":" for (int l = 0; l < nlevels; ++l) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2747"}},{"Add":{"text":" const int comp0 = firstcomp_level.at(l);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2800"}},{"Add":{"text":" const int ncomps = ncomps_level.at(l);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2851"}},{"Add":{"text":" vector data;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2881"}},{"Add":{"text":" data.reserve(ncomps);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2915"}},{"Add":{"text":" for (int c = 0; c < ncomps; ++c)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:2960"}},{"Add":{"text":" data.push_back(comp0 + c);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3001"}},{"Add":{"text":" segment_types.push_back(DB_BLOCKCENT);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3052"}},{"Add":{"text":" segment_data.push_back(move(data));","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3100"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3112"}},{"Add":{"text":" vector segment_lengths;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3151"}},{"Add":{"text":" vector segment_data_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3200"}},{"Add":{"text":" segment_lengths.reserve(segment_data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3256"}},{"Add":{"text":" segment_data_ptrs.reserve(segment_data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3314"}},{"Add":{"text":" for (const auto &data : segment_data) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3364"}},{"Add":{"text":" segment_lengths.push_back(data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3416"}},{"Add":{"text":" segment_data_ptrs.push_back(data.data());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3470"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3482"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3483"}},{"Add":{"text":" ierr = DBPutGroupelmap(metafile.get(), levelmaps_name.c_str(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3556"}},{"Add":{"text":" nlevels, segment_types.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3620"}},{"Add":{"text":" segment_lengths.data(), nullptr,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3686"}},{"Add":{"text":" segment_data_ptrs.data(), nullptr, 0, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3767"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3792"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3802"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3803"}},{"Add":{"text":" // Describe which components are children of which other components","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3879"}},{"Add":{"text":" // Question: Can this name be changed?","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:3926"}},{"Add":{"text":" const string childmaps_name = multimeshname + \"_wmrgtree_chldMaps\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4002"}},{"Add":{"text":" vector num_children;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4036"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4046"}},{"Add":{"text":" vector segment_types;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4083"}},{"Add":{"text":" vector > segment_data;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4128"}},{"Add":{"text":" segment_types.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4175"}},{"Add":{"text":" segment_data.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4221"}},{"Add":{"text":" for (const auto &leveldata : ghext->leveldata) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4280"}},{"Add":{"text":" const int level = leveldata.level;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4327"}},{"Add":{"text":" const int fine_level = level + 1;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4373"}},{"Add":{"text":" if (fine_level < nlevels) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4413"}},{"Add":{"text":" const auto &groupdata = *leveldata.groupdata.at(gi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4480"}},{"Add":{"text":" const MultiFab &mfab = *groupdata.mfab[tl];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4538"}},{"Add":{"text":" const auto &fine_leveldata = ghext->leveldata.at(fine_level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4614"}},{"Add":{"text":" const auto &fine_groupdata = *fine_leveldata.groupdata.at(gi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4691"}},{"Add":{"text":" const MultiFab &fine_mfab = *fine_groupdata.mfab[tl];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4759"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4760"}},{"Add":{"text":" const int ncomps = ncomps_level.at(level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4817"}},{"Add":{"text":" const int fine_comp0 = firstcomp_level.at(fine_level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4886"}},{"Add":{"text":" const BoxArray &fine_boxarray = fine_mfab.boxarray;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:4952"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":520,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":13131}],"down_context":[{"change":2,"pos":13131}],"flag":"BLOCK","start":4954,"end":16336,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" for (int component = 0; component < ncomps; ++component) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5026"}},{"Add":{"text":" const Box &box = mfab.box(component); // interior","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5092"}},{"Add":{"text":" Box refined_box(box);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5130"}},{"Add":{"text":" refined_box.refine(2);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5169"}},{"Add":{"text":" const vector > child_boxes =","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5229"}},{"Add":{"text":" fine_boxarray.intersections(refined_box);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5291"}},{"Add":{"text":" vector children;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5329"}},{"Add":{"text":" children.reserve(child_boxes.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5383"}},{"Add":{"text":" for (const auto &ib : child_boxes) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5436"}},{"Add":{"text":" const int fine_component = ib.first;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5491"}},{"Add":{"text":" children.push_back(fine_comp0 + fine_component);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5558"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5576"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5577"}},{"Add":{"text":" segment_types.push_back(DB_BLOCKCENT);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5632"}},{"Add":{"text":" segment_data.push_back(move(children));","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5688"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5704"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5705"}},{"Add":{"text":" } else {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5726"}},{"Add":{"text":" // no finer level, hence no children","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5777"}},{"Add":{"text":" const int ncomps = ncomps_level.at(level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5834"}},{"Add":{"text":" for (int component = 0; component < ncomps; ++component) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5907"}},{"Add":{"text":" segment_types.push_back(DB_BLOCKCENT);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:5962"}},{"Add":{"text":" segment_data.emplace_back();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6007"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6023"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6037"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6049"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6050"}},{"Add":{"text":" vector &segment_lengths = num_children;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6105"}},{"Add":{"text":" vector segment_data_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6154"}},{"Add":{"text":" segment_lengths.reserve(segment_data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6210"}},{"Add":{"text":" segment_data_ptrs.reserve(segment_data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6268"}},{"Add":{"text":" for (const auto &data : segment_data) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6318"}},{"Add":{"text":" segment_lengths.push_back(data.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6370"}},{"Add":{"text":" segment_data_ptrs.push_back(data.data());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6424"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6436"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6437"}},{"Add":{"text":" ierr = DBPutGroupelmap(metafile.get(), childmaps_name.c_str(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6510"}},{"Add":{"text":" ncomps_total, segment_types.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6579"}},{"Add":{"text":" segment_lengths.data(), nullptr,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6645"}},{"Add":{"text":" segment_data_ptrs.data(), nullptr, 0, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6726"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6751"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6761"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6762"}},{"Add":{"text":" // Create Mrgtree","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6788"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6798"}},{"Add":{"text":" const int max_mgrtree_children = 2;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6844"}},{"Add":{"text":" const DB::ptr mrgtree = DB::make(","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6899"}},{"Add":{"text":" DBMakeMrgtree(DB_MULTIMESH, 0, max_mgrtree_children, nullptr));","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:6977"}},{"Add":{"text":" assert(mrgtree);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7004"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7005"}},{"Add":{"text":" // Describe AMR configuration","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7045"}},{"Add":{"text":" const int max_amr_decomp_children = 2;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7094"}},{"Add":{"text":" ierr = DBAddRegion(mrgtree.get(), \"amr_decomp\", 0,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7155"}},{"Add":{"text":" max_amr_decomp_children, nullptr, 0, nullptr,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7230"}},{"Add":{"text":" nullptr, nullptr, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7287"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7312"}},{"Add":{"text":" ierr = DBSetCwr(mrgtree.get(), \"amr_decomp\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7368"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7397"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7398"}},{"Add":{"text":" // Describe AMR levels","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7431"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7443"}},{"Add":{"text":" ierr = DBAddRegion(mrgtree.get(), \"levels\", 0, nlevels, nullptr, 0,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7523"}},{"Add":{"text":" nullptr, nullptr, nullptr, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7591"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7618"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7619"}},{"Add":{"text":" ierr = DBSetCwr(mrgtree.get(), \"levels\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7673"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7704"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7705"}},{"Add":{"text":" const vector region_names{\"@level%d@n\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7766"}},{"Add":{"text":" vector region_name_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7817"}},{"Add":{"text":" region_name_ptrs.reserve(region_names.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7876"}},{"Add":{"text":" for (const string &name : region_names)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7928"}},{"Add":{"text":" region_name_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7984"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:7985"}},{"Add":{"text":" vector segment_ids;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8022"}},{"Add":{"text":" vector segment_types;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8061"}},{"Add":{"text":" segment_ids.reserve(nlevels);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8103"}},{"Add":{"text":" segment_types.reserve(nlevels);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8147"}},{"Add":{"text":" for (int l = 0; l < nlevels; ++l) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8195"}},{"Add":{"text":" segment_ids.push_back(l);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8235"}},{"Add":{"text":" segment_types.push_back(DB_BLOCKCENT);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8288"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8302"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8303"}},{"Add":{"text":" ierr = DBAddRegionArray(","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8340"}},{"Add":{"text":" mrgtree.get(), nlevels, region_name_ptrs.data(), 0,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8408"}},{"Add":{"text":" levelmaps_name.c_str(), 1, segment_ids.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8471"}},{"Add":{"text":" ncomps_level.data(), segment_types.data(), nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8540"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8567"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8568"}},{"Add":{"text":" ierr = DBSetCwr(mrgtree.get(), \"..\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8618"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8649"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8661"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8662"}},{"Add":{"text":" // Describe AMR children","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8697"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8709"}},{"Add":{"text":" ierr = DBAddRegion(mrgtree.get(), \"patches\", 0, ncomps_total,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8783"}},{"Add":{"text":" nullptr, 0, nullptr, nullptr, nullptr, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8863"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8894"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8895"}},{"Add":{"text":" ierr = DBSetCwr(mrgtree.get(), \"patches\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8950"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8981"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:8982"}},{"Add":{"text":" const vector region_names{\"@patch%d@n\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9043"}},{"Add":{"text":" vector region_name_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9094"}},{"Add":{"text":" region_name_ptrs.reserve(region_names.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9153"}},{"Add":{"text":" for (const string &name : region_names)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9205"}},{"Add":{"text":" region_name_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9261"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9262"}},{"Add":{"text":" vector segment_types;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9301"}},{"Add":{"text":" vector segment_ids;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9338"}},{"Add":{"text":" segment_types.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9387"}},{"Add":{"text":" segment_ids.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9434"}},{"Add":{"text":" for (int c = 0; c < ncomps_total; ++c) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9487"}},{"Add":{"text":" segment_ids.push_back(c);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9527"}},{"Add":{"text":" segment_types.push_back(DB_BLOCKCENT);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9580"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9594"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9595"}},{"Add":{"text":" ierr = DBAddRegionArray(","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9632"}},{"Add":{"text":" mrgtree.get(), ncomps_total, region_name_ptrs.data(), 0,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9705"}},{"Add":{"text":" childmaps_name.c_str(), 1, segment_ids.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9768"}},{"Add":{"text":" num_children.data(), segment_types.data(), nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9837"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9838"}},{"Add":{"text":" ierr = DBSetCwr(mrgtree.get(), \"..\");","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9888"}},{"Add":{"text":" assert(ierr >= 0);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9919"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9931"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9932"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9944"}},{"Add":{"text":" const vector mrgv_onames{","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:9990"}},{"Add":{"text":" multimeshname + \"_wmrgtree_lvlRatios\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10045"}},{"Add":{"text":" multimeshname + \"_wmrgtree_ijkExts\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10098"}},{"Add":{"text":" multimeshname + \"_wmrgtree_xyzExts\", \"rank\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10160"}},{"Add":{"text":" vector mrgv_oname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10210"}},{"Add":{"text":" mrgv_oname_ptrs.reserve(mrgv_onames.size() + 1);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10271"}},{"Add":{"text":" for (const string &name : mrgv_onames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10322"}},{"Add":{"text":" mrgv_oname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10377"}},{"Add":{"text":" mrgv_oname_ptrs.push_back(nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10425"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10426"}},{"Add":{"text":" const DB::ptr optlist = DB::make(DBMakeOptlist(10));","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10502"}},{"Add":{"text":" assert(optlist);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10531"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10532"}},{"Add":{"text":" ierr = DBAddOption(optlist.get(), DBOPT_MRGV_ONAMES,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10597"}},{"Add":{"text":" mrgv_oname_ptrs.data());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10653"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10680"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10681"}},{"Add":{"text":" ierr = DBPutMrgtree(metafile.get(), \"mrgTree\", \"amr_mesh\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10752"}},{"Add":{"text":" mrgtree.get(), optlist.get());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10815"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10842"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10854"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10864"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10865"}},{"Add":{"text":" // Write refinement ratios","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10900"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10910"}},{"Add":{"text":" const string levelrationame = multimeshname + \"_wmrgtree_lvlRatios\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10989"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:10990"}},{"Add":{"text":" const vector compnames{\"iRatio\", \"jRatio\", \"kRatio\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11062"}},{"Add":{"text":" vector compname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11108"}},{"Add":{"text":" compname_ptrs.reserve(compnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11159"}},{"Add":{"text":" for (const string &name : compnames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11206"}},{"Add":{"text":" compname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11257"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11258"}},{"Add":{"text":" const vector regionnames{\"@level%d@n\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11316"}},{"Add":{"text":" vector regionname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11364"}},{"Add":{"text":" regionname_ptrs.reserve(regionnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11419"}},{"Add":{"text":" for (const string &name : regionnames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11468"}},{"Add":{"text":" regionname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11521"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11522"}},{"Add":{"text":" array, ndims> data;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11564"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11608"}},{"Add":{"text":" data[d].reserve(1);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11640"}},{"Add":{"text":" data[d].push_back(2);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11674"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11686"}},{"Add":{"text":" array data_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11734"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11776"}},{"Add":{"text":" data_ptrs[d] = data[d].data();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11819"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11820"}},{"Add":{"text":" ierr = DBPutMrgvar(metafile.get(), levelrationame.c_str(), \"mrgTree\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11900"}},{"Add":{"text":" ndims, compname_ptrs.data(), nlevels,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:11967"}},{"Add":{"text":" regionname_ptrs.data(), DB_INT, data_ptrs.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12046"}},{"Add":{"text":" nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12085"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12110"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12120"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12121"}},{"Add":{"text":" typedef array, 2> iextent_t;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12176"}},{"Add":{"text":" typedef array, 2> extent_t;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12233"}},{"Add":{"text":" vector iextents;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12269"}},{"Add":{"text":" vector extents;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12303"}},{"Add":{"text":" iextents.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12343"}},{"Add":{"text":" extents.reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12382"}},{"Add":{"text":" for (const auto &leveldata : ghext->leveldata) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12439"}},{"Add":{"text":" const auto &groupdata = *leveldata.groupdata.at(gi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12502"}},{"Add":{"text":" const int tl = 0;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12530"}},{"Add":{"text":" const MultiFab &mfab = *groupdata.mfab[tl];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12584"}},{"Add":{"text":" const Geometry &geom = ghext->amrcore->Geom(leveldata.level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12656"}},{"Add":{"text":" const double *const x0 = geom.ProbLo();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12706"}},{"Add":{"text":" const double *const dx = geom.CellSize();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12758"}},{"Add":{"text":" const int nfabs = mfab.size();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12799"}},{"Add":{"text":" for (int c = 0; c < nfabs; ++c) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12843"}},{"Add":{"text":" const Box &fabbox = mfab.fabbox(c); // exterior","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12903"}},{"Add":{"text":" iextent_t iextent;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12934"}},{"Add":{"text":" extent_t extent;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:12963"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13009"}},{"Add":{"text":" iextent[0][d] = fabbox.smallEnd(d);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13059"}},{"Add":{"text":" iextent[1][d] = fabbox.bigEnd(d);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13107"}},{"Add":{"text":" extent[0][d] = x0[d] + fabbox.smallEnd(d) * dx[d];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13172"}},{"Add":{"text":" extent[1][d] = x0[d] + fabbox.bigEnd(d) * dx[d];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13235"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13249"}},{"Add":{"text":" iextents.push_back(iextent);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13290"}},{"Add":{"text":" extents.push_back(extent);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13329"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13341"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13351"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13352"}},{"Add":{"text":" // Write extents","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13377"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13387"}},{"Add":{"text":" const string iextentsname = multimeshname + \"_wmrgtree_ijkExts\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13462"}},{"Add":{"text":" const string extentsname = multimeshname + \"_wmrgtree_xyzExts\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13536"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13537"}},{"Add":{"text":" const vector icompnames{\"iMin\", \"iMax\", \"jMin\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13603"}},{"Add":{"text":" \"jMax\", \"kMin\", \"kMax\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13670"}},{"Add":{"text":" const vector compnames{\"xMin\", \"xMax\", \"yMin\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13735"}},{"Add":{"text":" \"yMax\", \"zMin\", \"zMax\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13801"}},{"Add":{"text":" vector icompname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13848"}},{"Add":{"text":" icompname_ptrs.reserve(icompnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13901"}},{"Add":{"text":" for (const string &name : icompnames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:13949"}},{"Add":{"text":" icompname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14001"}},{"Add":{"text":" vector compname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14047"}},{"Add":{"text":" compname_ptrs.reserve(compnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14098"}},{"Add":{"text":" for (const string &name : compnames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14145"}},{"Add":{"text":" compname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14196"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14197"}},{"Add":{"text":" const vector regionnames{\"@patch%d@n\"};","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14255"}},{"Add":{"text":" vector regionname_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14303"}},{"Add":{"text":" regionname_ptrs.reserve(regionnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14358"}},{"Add":{"text":" for (const string &name : regionnames)","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14407"}},{"Add":{"text":" regionname_ptrs.push_back(name.c_str());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14460"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14461"}},{"Add":{"text":" array, 2>, ndims> idata;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14514"}},{"Add":{"text":" array, 2>, ndims> data;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14569"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14613"}},{"Add":{"text":" for (int f = 0; f < 2; ++f) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14655"}},{"Add":{"text":" idata[d][f].reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14704"}},{"Add":{"text":" data[d][f].reserve(ncomps_total);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14752"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14766"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14778"}},{"Add":{"text":" for (int c = 0; c < ncomps_total; ++c) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14829"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14875"}},{"Add":{"text":" for (int f = 0; f < 2; ++f) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14919"}},{"Add":{"text":" idata[d][f].push_back(iextents[c][f][d]);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:14977"}},{"Add":{"text":" data[d][f].push_back(extents[c][f][d]);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15033"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15049"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15063"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15075"}},{"Add":{"text":" array, ndims> idata_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15134"}},{"Add":{"text":" array, ndims> data_ptrs;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15192"}},{"Add":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15236"}},{"Add":{"text":" for (int f = 0; f < 2; ++f) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15278"}},{"Add":{"text":" idata_ptrs[d][f] = idata[d][f].data();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15331"}},{"Add":{"text":" data_ptrs[d][f] = data[d][f].data();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15382"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15396"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15408"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15409"}},{"Add":{"text":" ierr = DBPutMrgvar(metafile.get(), iextentsname.c_str(), \"mrgTree\",","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15487"}},{"Add":{"text":" ndims, icompname_ptrs.data(), nlevels,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15555"}},{"Add":{"text":" regionname_ptrs.data(), DB_INT, idata_ptrs.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15635"}},{"Add":{"text":" nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15674"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15699"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15700"}},{"Add":{"text":" ierr =","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15717"}},{"Add":{"text":" DBPutMrgvar(metafile.get(), extentsname.c_str(), \"mrgTree\", ndims,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15798"}},{"Add":{"text":" compname_ptrs.data(), nlevels, regionname_ptrs.data(),","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15879"}},{"Add":{"text":" DB_INT, data_ptrs.data(), nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15941"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15966"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15967"}},{"Add":{"text":" // Write rank","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:15991"}},{"Add":{"text":" const int rank = ndims;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16025"}},{"Add":{"text":" const int *const rank_ptr = &rank;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16070"}},{"Add":{"text":" ierr = DBPutMrgvar(metafile.get(), \"rank\", \"mrgTree\", 1, nullptr,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16146"}},{"Add":{"text":" ncomps_total, regionname_ptrs.data(), DB_INT,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16221"}},{"Add":{"text":" &rank_ptr, nullptr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16271"}},{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16296"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16306"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16307"}},{"Add":{"text":" // Write multimesh","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16334"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16335"}}]}},{"Replacement":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":811,"ins":{"up_context":[{"change":2,"pos":13524}],"down_context":[{"change":2,"pos":13651}],"flag":"BLOCK","start":16337,"end":16566,"inode":{"change":2,"pos":38}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":2,"pos":13524},"to":{"change":2,"start":13524,"end":13651},"introduced_by":2}],"inode":{"change":2,"pos":38}},"ins_contents":[{"Add":{"text":" const string proc_filename =","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16377"}},{"Add":{"text":" make_subdirname(simulation_name, cctk_iteration) + \"/\" +","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16450"}},{"Add":{"text":" make_filename(simulation_name, cctk_iteration,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16513"}},{"Add":{"text":" proc / ioproc_every);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16565"}}],"del_contents":[{"Del":{"text":" const string proc_filename = make_filename(","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:13579"}},{"Del":{"text":" simulation_name, cctk_iteration, proc / ioproc_every);","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:13650"}}]}},{"Replacement":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":844,"ins":{"up_context":[{"change":2,"pos":14662}],"down_context":[{"change":2,"pos":15595}],"flag":"BLOCK","start":16567,"end":17563,"inode":{"change":2,"pos":38}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":2,"pos":14662},"to":{"change":2,"start":14662,"end":15595},"introduced_by":2}],"inode":{"change":2,"pos":38}},"ins_contents":[{"Add":{"text":" // typedef array, 2> extent_t;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16626"}},{"Add":{"text":" // vector extents;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16663"}},{"Add":{"text":" // extents.reserve(meshnames.size());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16709"}},{"Add":{"text":" // for (const auto &leveldata : ghext->leveldata) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16769"}},{"Add":{"text":" // const auto &groupdata = *leveldata.groupdata.at(gi);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16835"}},{"Add":{"text":" // const int tl = 0;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16866"}},{"Add":{"text":" // const MultiFab &mfab = *groupdata.mfab[tl];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16923"}},{"Add":{"text":" // const Geometry &geom = ghext->amrcore->Geom(leveldata.level);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:16998"}},{"Add":{"text":" // const double *const x0 = geom.ProbLo();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17051"}},{"Add":{"text":" // const double *const dx = geom.CellSize();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17106"}},{"Add":{"text":" // const int nfabs = mfab.size();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17150"}},{"Add":{"text":" // for (int c = 0; c < nfabs; ++c) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17197"}},{"Add":{"text":" // const Box &fabbox = mfab.fabbox(c); // exterior","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17260"}},{"Add":{"text":" // extent_t extent;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17292"}},{"Add":{"text":" // for (int d = 0; d < ndims; ++d) {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17341"}},{"Add":{"text":" // extent[0][d] = x0[d] + fabbox.smallEnd(d) * dx[d];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17409"}},{"Add":{"text":" // extent[1][d] = x0[d] + fabbox.bigEnd(d) * dx[d];","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17475"}},{"Add":{"text":" // }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17492"}},{"Add":{"text":" // extents.push_back(extent);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17534"}},{"Add":{"text":" // }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17549"}},{"Add":{"text":" // }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17562"}}],"del_contents":[{"Del":{"text":" typedef array, 2> extent_t;","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14718"}},{"Del":{"text":" vector extents;","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14752"}},{"Del":{"text":" extents.reserve(meshnames.size());","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14795"}},{"Del":{"text":" for (const auto &leveldata : ghext->leveldata) {","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14852"}},{"Del":{"text":" const auto &groupdata = *leveldata.groupdata.at(gi);","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14915"}},{"Del":{"text":" const int tl = 0;","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14943"}},{"Del":{"text":" const MultiFab &mfab = *groupdata.mfab[tl];","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:14997"}},{"Del":{"text":" const Geometry &geom = ghext->amrcore->Geom(leveldata.level);","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15069"}},{"Del":{"text":" const double *const x0 = geom.ProbLo();","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15119"}},{"Del":{"text":" const double *const dx = geom.CellSize();","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15171"}},{"Del":{"text":" const int nfabs = mfab.size();","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15212"}},{"Del":{"text":" for (int c = 0; c < nfabs; ++c) {","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15256"}},{"Del":{"text":" const Box &fabbox = mfab.fabbox(c); // exterior","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15316"}},{"Del":{"text":" extent_t extent;","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15345"}},{"Del":{"text":" for (int d = 0; d < ndims; ++d) {","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15391"}},{"Del":{"text":" extent[0][d] = x0[d] + fabbox.smallEnd(d) * dx[d];","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15456"}},{"Del":{"text":" extent[1][d] = x0[d] + fabbox.bigEnd(d) * dx[d];","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15519"}},{"Del":{"text":" }","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15533"}},{"Del":{"text":" extents.push_back(extent);","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15572"}},{"Del":{"text":" }","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15584"}},{"Del":{"text":" }","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:15594"}}]}},{"Edit":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":891,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":16756}],"down_context":[{"change":2,"pos":16756}],"flag":"BLOCK","start":17564,"end":17765,"inode":{"change":2,"pos":38}}},"contents":[{"Add":{"text":" assert(!ierr);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17586"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17587"}},{"Add":{"text":" const string mrgtreename = \"mrgtree\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17633"}},{"Add":{"text":" ierr = DBAddOption(optlist.get(), DBOPT_MRGTREE_NAME,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17695"}},{"Add":{"text":" const_cast(mrgtreename.c_str()));","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17764"}}]}},{"Replacement":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":948,"ins":{"up_context":[{"change":2,"pos":18614}],"down_context":[{"change":2,"pos":18745}],"flag":"BLOCK","start":17766,"end":18003,"inode":{"change":2,"pos":38}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":2,"pos":18614},"to":{"change":2,"start":18614,"end":18745},"introduced_by":2}],"inode":{"change":2,"pos":38}},"ins_contents":[{"Add":{"text":" const string proc_filename =","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17808"}},{"Add":{"text":" make_subdirname(simulation_name, cctk_iteration) + \"/\" +","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17883"}},{"Add":{"text":" make_filename(simulation_name, cctk_iteration,","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:17948"}},{"Add":{"text":" proc / ioproc_every);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18002"}}],"del_contents":[{"Del":{"text":" const string proc_filename = make_filename(","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:18671"}},{"Del":{"text":" simulation_name, cctk_iteration, proc / ioproc_every);","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:18744"}}]}},{"Replacement":{"inode":{"change":2,"pos":38},"path":"CarpetX/src/io_silo.cxx","line":970,"ins":{"up_context":[{"change":2,"pos":19435}],"down_context":[{"change":2,"pos":19462}],"flag":"BLOCK","start":18004,"end":18378,"inode":{"change":2,"pos":38}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":2,"pos":19435},"to":{"change":2,"start":19435,"end":19462},"introduced_by":2}],"inode":{"change":2,"pos":38}},"ins_contents":[{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18004"}},{"Add":{"text":" {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18010"}},{"Add":{"text":" const string visitname = [&]() {","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18049"}},{"Add":{"text":" ostringstream buf;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18076"}},{"Add":{"text":" buf << out_dir << \"/\" << simulation_name << \".visit\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18138"}},{"Add":{"text":" return buf.str();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18164"}},{"Add":{"text":" }();","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18175"}},{"Add":{"text":" ofstream visit(visitname, ios::app);","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18218"}},{"Add":{"text":" assert(visit.good());","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18246"}},{"Add":{"text":" visit << make_filename(simulation_name, cctk_iteration) << \"\\n\";","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18317"}},{"Add":{"text":" }","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18323"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18324"}},{"Add":{"text":" } // if write metadata","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18349"}},{"Add":{"text":"","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18350"}},{"Add":{"text":" interval_meta = nullptr;","pos":"6D6MZBKTLXUK4ZCIFUPNV7XT64XSFFG4CL6HN6ONK5ONM6MR64AAC:18377"}}],"del_contents":[{"Del":{"text":" } // if write metadata","pos":"2MTD37PDBF7KZKC6LXG2IVDYMMUMNNS557WMFVSCZM3SAKOGDC5QC:19461"}}]}}],"owner":"eschnett","repo":"cactusamrex","login":null}

…

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