{"header":{"message":"Pipelines: Build Cactus\n","description":null,"timestamp":"2019-07-14T03:00:05Z","authors":[{"email":"schnetter@gmail.com","name":"Erik Schnetter"}]},"hash":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC","authors":[],"deps":{"hashes":[["HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC","Pipelines: Build Cactus\n"],["AA",null],["WKFYNYHZIPPSDL7K35JYHUFT7KPHDBPXCDYAM3LYKI45Y43KEQGAC","Enable Azure Pipelines\n"]],"deps":["WKFYNYHZIPPSDL7K35JYHUFT7KPHDBPXCDYAM3LYKI45Y43KEQGAC"],"known":[]},"hunks":[{"FileAdd":{"meta":{"basename":"amrex.th","metadata":420},"path":"amrex.th","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"# Component list for the Einstein Toolkit ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:83"}},{"Add":{"text":"# $Revision$","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:96"}},{"Add":{"text":"# $Date$","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:105"}},{"Add":{"text":"# $HeadURL$","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:117"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:118"}},{"Add":{"text":"!CRL_VERSION = 1.0","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:137"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:138"}},{"Add":{"text":"!DEFINE ROOT = Cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:160"}},{"Add":{"text":"!DEFINE ARR = $ROOT/arrangements","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:194"}},{"Add":{"text":"!DEFINE COMPONENTLIST_TARGET = $ROOT/thornlists","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:242"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:243"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:244"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:245"}},{"Add":{"text":"# To download these thorns via GetComponents, use then the following","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:314"}},{"Add":{"text":"# command (on the same system where you originally used","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:370"}},{"Add":{"text":"# GetComponents):","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:388"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:389"}},{"Add":{"text":"# cd Cactus (or whatever your source tree is called)","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:444"}},{"Add":{"text":"# bin/GetComponents --update --root=. manifest/einsteintoolkit.th","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:512"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:513"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:514"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:515"}},{"Add":{"text":"# This thorn list","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:533"}},{"Add":{"text":"!TARGET = $ROOT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:551"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:567"}},{"Add":{"text":"!URL = https://bitbucket.org/einsteintoolkit/manifest.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:630"}},{"Add":{"text":"!REPO_PATH= $1","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:645"}},{"Add":{"text":"!NAME = manifest","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:666"}},{"Add":{"text":"!CHECKOUT = ./manifest","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:689"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:690"}},{"Add":{"text":"# Cactus Flesh","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:705"}},{"Add":{"text":"!TARGET = $ROOT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:723"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:739"}},{"Add":{"text":"!URL = https://bitbucket.org/cactuscode/cactus.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:795"}},{"Add":{"text":"!NAME = flesh","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:813"}},{"Add":{"text":"!CHECKOUT = .clang-format CONTRIBUTORS COPYRIGHT doc lib Makefile src","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:883"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:884"}},{"Add":{"text":"# Simulation Factory","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:905"}},{"Add":{"text":"!TARGET = $ROOT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:923"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:939"}},{"Add":{"text":"!URL = https://bitbucket.org/simfactory/simfactory2.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1000"}},{"Add":{"text":"!REPO_PATH=$1","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1014"}},{"Add":{"text":"!NAME = simfactory2","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1038"}},{"Add":{"text":"!CHECKOUT = ./simfactory","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1063"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1064"}},{"Add":{"text":"# Example parameter files","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1090"}},{"Add":{"text":"!TARGET = $ROOT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1108"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1124"}},{"Add":{"text":"!URL = https://bitbucket.org/einsteintoolkit/einsteinexamples.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1195"}},{"Add":{"text":"!CHECKOUT = par","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1211"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1212"}},{"Add":{"text":"# Various Cactus utilities","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1239"}},{"Add":{"text":"!TARGET = $ROOT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1257"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1273"}},{"Add":{"text":"!URL = https://bitbucket.org/cactuscode/utilities.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1332"}},{"Add":{"text":"!REPO_PATH= $1","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1347"}},{"Add":{"text":"!NAME = utils","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1365"}},{"Add":{"text":"!CHECKOUT = ./utils","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1385"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1386"}},{"Add":{"text":"# The GetComponents script","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1413"}},{"Add":{"text":"!TARGET = $ROOT/bin","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1435"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1451"}},{"Add":{"text":"!URL = https://github.com/gridaphobe/CRL.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1501"}},{"Add":{"text":"!CHECKOUT = GetComponents","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1527"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1528"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1529"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1530"}},{"Add":{"text":"# CactusBase thorns","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1550"}},{"Add":{"text":"!TARGET = $ARR","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1567"}},{"Add":{"text":"!TYPE = git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1583"}},{"Add":{"text":"!URL = https://bitbucket.org/cactuscode/cactusbase.git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1643"}},{"Add":{"text":"!REPO_PATH= $2","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1658"}},{"Add":{"text":"!CHECKOUT =","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1670"}},{"Add":{"text":"CactusBase/Boundary","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1690"}},{"Add":{"text":"# CactusBase/CartGrid3D","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1714"}},{"Add":{"text":"CactusBase/CoordBase","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1735"}},{"Add":{"text":"CactusBase/Fortran","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1754"}},{"Add":{"text":"CactusBase/InitBase","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1774"}},{"Add":{"text":"# CactusBase/IOASCII","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1795"}},{"Add":{"text":"CactusBase/IOBasic","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1814"}},{"Add":{"text":"CactusBase/IOUtil","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1832"}},{"Add":{"text":"CactusBase/SymBase","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1851"}},{"Add":{"text":"CactusBase/Time","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1867"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1868"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1869"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1870"}},{"Add":{"text":"# Additional Cactus thorns","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1897"}},{"Add":{"text":"!TARGET = $ARR","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1914"}},{"Add":{"text":"!TYPE = svn","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1930"}},{"Add":{"text":"!URL = https://svn.cactuscode.org/projects/$1/$2/trunk","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:1990"}},{"Add":{"text":"!CHECKOUT =","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2002"}},{"Add":{"text":"ExternalLibraries/MPI","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2024"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2025"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2026"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2027"}},{"Add":{"text":"# AMReX thorns","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2042"}},{"Add":{"text":"AMReX/AMReX","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2054"}},{"Add":{"text":"# AMReX/AMReXTest","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2072"}},{"Add":{"text":"AMReX/WaveToyAMReX","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2091"}}]}},{"Edit":{"inode":{"change":2,"pos":570},"path":"azure-pipelines.yml","line":31,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":1079}],"down_context":[{"change":2,"pos":1079}],"flag":"BLOCK","start":2093,"end":2126,"inode":{"change":2,"pos":570}}},"contents":[{"Add":{"text":" export AMREX_DIR=$HOME/amrex","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2125"}}]}},{"Edit":{"inode":{"change":2,"pos":570},"path":"azure-pipelines.yml","line":33,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":1108}],"down_context":[{"change":2,"pos":1108}],"flag":"BLOCK","start":2127,"end":2792,"inode":{"change":2,"pos":570}}},"contents":[{"Add":{"text":"- script: |","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2138"}},{"Add":{"text":" wget https://raw.githubusercontent.com/gridaphobe/CRL/ET_2019_03/GetComponents","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2221"}},{"Add":{"text":" chmod a+x GetComponents","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2249"}},{"Add":{"text":" ./GetComponents --parallel $HOME/cactusamrex/amrex.th","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2307"}},{"Add":{"text":" cd Cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2321"}},{"Add":{"text":" echo 'ubuntu >$HOME/.hostname","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2355"}},{"Add":{"text":" cp cactusamrex/defs.local.ini simfactory/etc/defs.local.ini","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2419"}},{"Add":{"text":" cp cactusamrex/ubuntu.ini simfactory/mdb/machines/ubuntu.ini","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2484"}},{"Add":{"text":" cp cactusamrex/ubuntu.cfg simfactory/mdb/optionlists/ubuntu.cfg","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2552"}},{"Add":{"text":" cp cactusamrex/ubuntu.sub simfactory/mdb/submitscripts/ubuntu.sub","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2622"}},{"Add":{"text":" cp cactusamrex/ubuntu.run simfactory/mdb/runscripts/ubuntu.run","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2689"}},{"Add":{"text":" ./simfactory/bin/sim build -j2 --thornlist=$HOME/cactusamrex/amrex.th","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2763"}},{"Add":{"text":" displayName: Build Cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2791"}}]}},{"FileAdd":{"meta":{"basename":"defs.local.ini","metadata":420},"path":"defs.local.ini","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"# -*-conf-*-","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2823"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2824"}},{"Add":{"text":"# Defaults for all machines","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2852"}},{"Add":{"text":"[default]","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2862"}},{"Add":{"text":"user = cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2887"}},{"Add":{"text":"email = cactus@localhost","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2922"}},{"Add":{"text":"thornlist = manifest/einsteintoolkit.th","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2968"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2969"}},{"Add":{"text":"[ubuntu]","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:2978"}},{"Add":{"text":"user = cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3003"}}]}},{"FileAdd":{"meta":{"basename":"ubuntu.cfg","metadata":420},"path":"ubuntu.cfg","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"# Configuration for an Ubuntu installation, assuming the following","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3085"}},{"Add":{"text":"# list of packages is installed:","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3118"}},{"Add":{"text":"#","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3120"}},{"Add":{"text":"# build-essential perl python gfortran g++ libmpich-dev","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3179"}},{"Add":{"text":"#","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3181"}},{"Add":{"text":"# In addition, installing the following list of packaed will prevent","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3250"}},{"Add":{"text":"# Cactus from compiling its own versions of these libraries:","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3311"}},{"Add":{"text":"#","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3313"}},{"Add":{"text":"# libfftw3-dev libgsl-dev libatlas-base-dev libjpeg-dev libssl-dev ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3383"}},{"Add":{"text":"# libhdf5-dev hdf5-tools libnuma-dev libltdl-dev libhwloc-dev zlib1g-dev","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3458"}},{"Add":{"text":"#","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3460"}},{"Add":{"text":"# Tools like GetComponents and Simfactory like to have the following list","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3534"}},{"Add":{"text":"# installed too","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3550"}},{"Add":{"text":"#","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3552"}},{"Add":{"text":"# python subversion git","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3578"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3579"}},{"Add":{"text":"# Whenever this version string changes, the application is configured ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3650"}},{"Add":{"text":"# and rebuilt from scratch ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3678"}},{"Add":{"text":"VERSION = ubuntu-2019-06-07","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3706"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3707"}},{"Add":{"text":"CPP = cpp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3717"}},{"Add":{"text":"FPP = cpp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3727"}},{"Add":{"text":"CC = gcc","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3737"}},{"Add":{"text":"CXX = g++","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3747"}},{"Add":{"text":"F77 = gfortran","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3762"}},{"Add":{"text":"F90 = gfortran","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3777"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3778"}},{"Add":{"text":"CPPFLAGS = -DMPICH_IGNORE_CXX_SEEK","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3813"}},{"Add":{"text":"FPPFLAGS = -traditional","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3837"}},{"Add":{"text":"CFLAGS = -pipe -g3 -march=ARCH -std=gnu11","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3881"}},{"Add":{"text":"CXXFLAGS = -pipe -g3 -march=ARCH -std=gnu++14","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:3927"}},{"Add":{"text":"F77FLAGS = -pipe -g3 -march=ARCH -fcray-pointer -ffixed-line-length-none -fno-range-check","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4017"}},{"Add":{"text":"F90FLAGS = -pipe -g3 -march=ARCH -fcray-pointer -ffixed-line-length-none -fno-range-check","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4107"}},{"Add":{"text":"LDFLAGS = -rdynamic","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4128"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4129"}},{"Add":{"text":"LIBDIRS =","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4139"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4140"}},{"Add":{"text":"C_LINE_DIRECTIVES = yes","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4164"}},{"Add":{"text":"F_LINE_DIRECTIVES = yes","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4188"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4189"}},{"Add":{"text":"DEBUG = no","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4210"}},{"Add":{"text":"CPP_DEBUG_FLAGS = -DCARPET_DEBUG","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4243"}},{"Add":{"text":"FPP_DEBUG_FLAGS = -DCARPET_DEBUG","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4276"}},{"Add":{"text":"C_DEBUG_FLAGS = -O0 ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4299"}},{"Add":{"text":"CXX_DEBUG_FLAGS = -O0 ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4322"}},{"Add":{"text":"F77_DEBUG_FLAGS = -O0","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4344"}},{"Add":{"text":"F90_DEBUG_FLAGS = -O0","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4366"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4367"}},{"Add":{"text":"OPTIMISE = yes","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4392"}},{"Add":{"text":"CPP_OPTIMISE_FLAGS = -DKRANC_VECTORS # -DCARPET_OPTIMISE -DNDEBUG","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4458"}},{"Add":{"text":"FPP_OPTIMISE_FLAGS = # -DCARPET_OPTIMISE -DNDEBUG","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4508"}},{"Add":{"text":"C_OPTIMISE_FLAGS = -O2 -ffast-math -fno-finite-math-only","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4567"}},{"Add":{"text":"CXX_OPTIMISE_FLAGS = -O2 -ffast-math -fno-finite-math-only","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4626"}},{"Add":{"text":"F77_OPTIMISE_FLAGS = -O2 -ffast-math -fno-finite-math-only","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4685"}},{"Add":{"text":"F90_OPTIMISE_FLAGS = -O2 -ffast-math -fno-finite-math-only","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4744"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4745"}},{"Add":{"text":"PROFILE = no","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4768"}},{"Add":{"text":"CPP_PROFILE_FLAGS =","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4788"}},{"Add":{"text":"FPP_PROFILE_FLAGS =","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4808"}},{"Add":{"text":"C_PROFILE_FLAGS = -pg","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4832"}},{"Add":{"text":"CXX_PROFILE_FLAGS = -pg","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4856"}},{"Add":{"text":"F77_PROFILE_FLAGS = -pg","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4880"}},{"Add":{"text":"F90_PROFILE_FLAGS = -pg","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4904"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4905"}},{"Add":{"text":"OPENMP = yes","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4928"}},{"Add":{"text":"CPP_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4956"}},{"Add":{"text":"FPP_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:4984"}},{"Add":{"text":"C_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5012"}},{"Add":{"text":"CXX_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5040"}},{"Add":{"text":"F77_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5068"}},{"Add":{"text":"F90_OPENMP_FLAGS = -fopenmp","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5096"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5097"}},{"Add":{"text":"WARN = yes","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5118"}},{"Add":{"text":"CPP_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5141"}},{"Add":{"text":"FPP_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5164"}},{"Add":{"text":"C_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5187"}},{"Add":{"text":"CXX_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5210"}},{"Add":{"text":"F77_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5233"}},{"Add":{"text":"F90_WARN_FLAGS = -Wall","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5256"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5257"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5258"}},{"Add":{"text":"# Ubuntu's libhwloc-dev is broken; see","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5297"}},{"Add":{"text":"# .","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5347"}},{"Add":{"text":"# You need to add the libnuma-dev libltdl-dev packages to use the","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5413"}},{"Add":{"text":"# system hwloc package and prevent this bug.","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5458"}},{"Add":{"text":"# On the other hand you must NOT install libnuma-dev unless you also","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5527"}},{"Add":{"text":"# install libhwloc-dev and libtldl-dev.","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5567"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5568"}},{"Add":{"text":"BLAS_DIR = /usr","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5584"}},{"Add":{"text":"LAPACK_DIR = /usr","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5602"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5603"}},{"Add":{"text":"MPI_DIR = /usr","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5618"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5619"}},{"Add":{"text":"OPENBLAS_DIR = /usr","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5639"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5640"}},{"Add":{"text":"PTHREADS_DIR = NO_BUILD","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5664"}}]}},{"FileAdd":{"meta":{"basename":"ubuntu.ini","metadata":420},"path":"ubuntu.ini","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"[docker]","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5688"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5689"}},{"Add":{"text":"# last-tested-on: 2019-06-06","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5718"}},{"Add":{"text":"# last-tested-by: Erik Schnetter ","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5773"}},{"Add":{"text":"# NOTE: presubmission is not supported","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5812"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5813"}},{"Add":{"text":"# Machine description","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5835"}},{"Add":{"text":"nickname = docker","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5860"}},{"Add":{"text":"name = Docker","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5885"}},{"Add":{"text":"location = anywhere","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5912"}},{"Add":{"text":"description = Running in a Docker container","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5960"}},{"Add":{"text":"status = personal","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5987"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:5988"}},{"Add":{"text":"# Access to this machine","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6013"}},{"Add":{"text":"hostname = docker","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6038"}},{"Add":{"text":"aliaspattern = ^docker$","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6065"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6066"}},{"Add":{"text":"# Source tree management","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6091"}},{"Add":{"text":"sourcebasedir = /cactus","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:6117"}},{"Add":{"text":"disabled-thorns = </dev/null 2>/dev/null & echo $!","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7317"}},{"Add":{"text":"submit = @SCRIPTFILE@ /dev/null 2>/dev/null; true & echo $!","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7398"}},{"Add":{"text":"getstatus = ps @JOB_ID@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7428"}},{"Add":{"text":"stop = kill @JOB_ID@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7460"}},{"Add":{"text":"submitpattern = (.*)","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7483"}},{"Add":{"text":"statuspattern = \"^ *@JOB_ID@ \"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7516"}},{"Add":{"text":"queuedpattern = $^","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7537"}},{"Add":{"text":"runningpattern = ^","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7557"}},{"Add":{"text":"holdingpattern = $^","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7578"}},{"Add":{"text":"exechost = echo localhost","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7611"}},{"Add":{"text":"exechostpattern = (.*)","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7634"}},{"Add":{"text":"stdout = cat @SIMULATION_NAME@.out","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7678"}},{"Add":{"text":"stderr = cat @SIMULATION_NAME@.err","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7722"}},{"Add":{"text":"stdout-follow = tail -n 100 -f @SIMULATION_NAME@.out @SIMULATION_NAME@.err","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7799"}}]}},{"FileAdd":{"meta":{"basename":"ubuntu.run","metadata":420},"path":"ubuntu.run","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"#! /bin/bash","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7827"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7828"}},{"Add":{"text":"echo \"Preparing:\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7846"}},{"Add":{"text":"set -x # Output commands","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7896"}},{"Add":{"text":"set -e # Abort on errors","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7946"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7947"}},{"Add":{"text":"cd @RUNDIR@-active","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7966"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7967"}},{"Add":{"text":"echo \"Checking:\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7984"}},{"Add":{"text":"pwd","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7988"}},{"Add":{"text":"hostname","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:7997"}},{"Add":{"text":"date","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8002"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8003"}},{"Add":{"text":"echo \"Environment:\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8023"}},{"Add":{"text":"export 'SIMULATION_ID=@SIMULATION_ID@'","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8062"}},{"Add":{"text":"export CACTUS_NUM_PROCS=@NUM_PROCS@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8098"}},{"Add":{"text":"export CACTUS_NUM_THREADS=@NUM_THREADS@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8138"}},{"Add":{"text":"export CACTUS_SET_THREAD_BINDINGS=0","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8174"}},{"Add":{"text":"export CXX_MAX_TASKS=1000","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8200"}},{"Add":{"text":"export GLIBCXX_FORCE_NEW=1","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8227"}},{"Add":{"text":"export GMON_OUT_PREFIX=gmon.out","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8259"}},{"Add":{"text":"export OMP_DISPLAY_ENV=TRUE","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8287"}},{"Add":{"text":"export OMP_MAX_TASKS=100","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8312"}},{"Add":{"text":"export OMP_NUM_THREADS=@NUM_THREADS@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8349"}},{"Add":{"text":"export OMP_PLACES=cores # threads, cores, sockets","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8403"}},{"Add":{"text":"export OMP_PROC_BIND=FALSE # false, true, master, close, spread","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8468"}},{"Add":{"text":"export OMP_STACKSIZE=8192 # kByte","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8504"}},{"Add":{"text":"env | sort >SIMFACTORY/ENVIRONMENT","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8539"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8540"}},{"Add":{"text":"# Enable this to allow core file","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8573"}},{"Add":{"text":"# ulimit -c unlimited","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8595"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8596"}},{"Add":{"text":"echo \"Starting:\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8613"}},{"Add":{"text":"# Disabling TCP BTL","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8633"}},{"Add":{"text":"export CACTUS_STARTTIME=$(date +%s)","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8669"}},{"Add":{"text":"time \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8719"}},{"Add":{"text":" /usr/bin/mpirun \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8769"}},{"Add":{"text":" -np @NUM_PROCS@ \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8819"}},{"Add":{"text":" --mca btl self,vader \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8869"}},{"Add":{"text":" -x CACTUS_NUM_PROCS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8919"}},{"Add":{"text":" -x CACTUS_NUM_THREADS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:8969"}},{"Add":{"text":" -x CACTUS_SET_THREAD_BINDINGS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9019"}},{"Add":{"text":" -x CACTUS_STARTTIME \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9069"}},{"Add":{"text":" -x CXX_MAX_TASKS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9119"}},{"Add":{"text":" -x GLIBCXX_FORCE_NEW \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9169"}},{"Add":{"text":" -x GMON_OUT_PREFIX \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9219"}},{"Add":{"text":" -x OMP_DISPLAY_ENV \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9269"}},{"Add":{"text":" -x OMP_MAX_TASKS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9319"}},{"Add":{"text":" -x OMP_NUM_THREADS \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9369"}},{"Add":{"text":" -x OMP_PLACES \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9419"}},{"Add":{"text":" -x OMP_PROC_BIND \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9469"}},{"Add":{"text":" -x OMP_STACKSIZE \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9519"}},{"Add":{"text":" @EXECUTABLE@ -L 3 @PARFILE@ \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9569"}},{"Add":{"text":" >@SIMULATION_NAME@.out \\","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9619"}},{"Add":{"text":" 2>@SIMULATION_NAME@.err","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9647"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9648"}},{"Add":{"text":"echo \"Stopping:\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9665"}},{"Add":{"text":"date","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9670"}},{"Add":{"text":"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9671"}},{"Add":{"text":"echo \"Done.\"","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9684"}}]}},{"FileAdd":{"meta":{"basename":"ubuntu.sub","metadata":420},"path":"ubuntu.sub","context":[{"change":1,"pos":0}],"contents":[{"Add":{"text":"#! /bin/bash","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9712"}},{"Add":{"text":"cd @SOURCEDIR@","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9727"}},{"Add":{"text":"exec @SIMFACTORY@ run @SIMULATION_NAME@ --machine=@MACHINE@ --restart-id=@RESTART_ID@ @FROM_RESTART_COMMAND@ @RUNDIR@/@SIMULATION_NAME@.log 2>&1","pos":"HNQLJR6ZWME6VBJ2Y7PSENLJPXC7INSS7NC2CKIWQAC776CQ74TQC:9884"}}]}}],"owner":"eschnett","repo":"cactusamrex","login":null}

…

Dependencies

Change contents

Review