{"header":{"message":"Z4c: Use TmunuBase\n","description":null,"timestamp":"2020-06-26T01:41:03Z","authors":[{"email":"schnetter@gmail.com","name":"Erik Schnetter"}]},"hash":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC","authors":[],"deps":{"hashes":[["IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC","Z4c: Use TmunuBase\n"],["AA",null],["ZSXLI5ZT6FSE6CISXMIOZ4Q2ZF5EIUQQD655GZMDVA3MX2OKT3JAC","Z4c: Allow disabling calculating analysis quantities\n\nThis speeds up things by a factor of 2. It's safe, I'm sure, because we track which variables are defined.\n"],["PXHMXU5HANPRQKDNFTAD4XBZXMZKU2OPGRHUSHN6B7VMFQMB2XFAC","Z4c: Set time derivativs of ADM variables correctly\n"],["FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC","Z4c: Much work, much debugging\n"],["GP6UYE5IVVG25EHEMT4EPKFUUWI2QUZSJCRSHOIVTM4AX4IVXBLAC","Z4c: New thorn\n"],["NUOLOGCKMF5UOBGBYEOX4O7NQ5AEVVLCH6KRBQRJQXIRDNJ2C2ZQC","Significant development. 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BenchmarkPlots","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36002"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36003"}},{"Add":{"text":"using AbstractPlotting","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36026"}},{"Add":{"text":"using CSV","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36036"}},{"Add":{"text":"using DataFrames","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36053"}},{"Add":{"text":"using Makie","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36065"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36066"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36067"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36068"}},{"Add":{"text":"# Load data","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36080"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36081"}},{"Add":{"text":"iterations = 10","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36097"}},{"Add":{"text":"integrator_steps = 4","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36118"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36119"}},{"Add":{"text":"bm = DataFrame(CSV.file(\"benchmark-minkowski-unigrid.csv\"))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36179"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36180"}},{"Add":{"text":"bm.points = bm.size.^3","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36203"}},{"Add":{"text":"bm.cores = bm.nodes .* bm.cores_node","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36240"}},{"Add":{"text":"bm.cost = bm.time .* bm.cores","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36270"}},{"Add":{"text":"bm.pointcost = bm.cost ./ bm.points ./ (iterations * integrator_steps)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36341"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36342"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36343"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36344"}},{"Add":{"text":"# Plot data","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36356"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36357"}},{"Add":{"text":"sc = Scene()","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36370"}},{"Add":{"text":"scatter!(sc, log10.(bm.cores), log10.(bm.pointcost))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36423"}},{"Add":{"text":"xlims!(sc,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36434"}},{"Add":{"text":" (floor(minimum(log10.(bm.cores))),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36476"}},{"Add":{"text":" ceil(maximum(log10.(bm.cores)))))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36518"}},{"Add":{"text":"xlabel!(sc, \"log₁₀(cores)\")","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36550"}},{"Add":{"text":"ylims!(sc,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36561"}},{"Add":{"text":" (floor(minimum(log10.(bm.pointcost))),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36607"}},{"Add":{"text":" ceil(maximum(log10.(bm.pointcost)))))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36653"}},{"Add":{"text":"ylabel!(sc, \"log₁₀(seconds per grid point)\")","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36702"}},{"Add":{"text":" ","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36704"}},{"Add":{"text":"end","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36708"}}]}},{"FileAdd":{"meta":{"basename":"benchmark-minkowski-unigrid.par","metadata":420},"path":"Z4c/par/benchmark-minkowski-unigrid.par","context":[{"change":3,"pos":2485}],"contents":[{"Add":{"text":"ActiveThorns = \"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36761"}},{"Add":{"text":" ADMBase","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36773"}},{"Add":{"text":" CarpetX","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36785"}},{"Add":{"text":" Formaline","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36799"}},{"Add":{"text":" IOUtil","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36810"}},{"Add":{"text":" ODESolvers","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36825"}},{"Add":{"text":" TimerReport","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36841"}},{"Add":{"text":" Z4c","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36849"}},{"Add":{"text":"\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36851"}},{"Add":{"text":" ","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36853"}},{"Add":{"text":"# Size 256: 40 GByte","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36874"}},{"Add":{"text":"# Size 320: 80 GByte","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36895"}},{"Add":{"text":"# Size 400: 160 GByte","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36917"}},{"Add":{"text":"# Size 512: 320 GByte","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36939"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36940"}},{"Add":{"text":"$ncells = 256","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36954"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36955"}},{"Add":{"text":"Cactus::cctk_show_schedule = yes","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36988"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:36989"}},{"Add":{"text":"Cactus::terminate = \"iteration\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37021"}},{"Add":{"text":"Cactus::cctk_itlast = 10","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37046"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37047"}},{"Add":{"text":"CarpetX::xmin = -1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37068"}},{"Add":{"text":"CarpetX::ymin = -1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37089"}},{"Add":{"text":"CarpetX::zmin = -1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37110"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37111"}},{"Add":{"text":"CarpetX::xmax = +1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37132"}},{"Add":{"text":"CarpetX::ymax = +1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37153"}},{"Add":{"text":"CarpetX::zmax = +1.0","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37174"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37175"}},{"Add":{"text":"CarpetX::ncells_x = $ncells","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37203"}},{"Add":{"text":"CarpetX::ncells_y = $ncells","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37231"}},{"Add":{"text":"CarpetX::ncells_z = $ncells","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37259"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37260"}},{"Add":{"text":"CarpetX::ghost_size = 3","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37284"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37285"}},{"Add":{"text":"ODESolvers::method = \"RK4\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37312"}},{"Add":{"text":"CarpetX::dtfac = 0.5","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37333"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37334"}},{"Add":{"text":"ADMBase::initial_data = \"Cartesian Minkowski\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37380"}},{"Add":{"text":"ADMBase::initial_lapse = \"one\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37411"}},{"Add":{"text":"ADMBase::initial_shift = \"zero\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37443"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37444"}},{"Add":{"text":"IO::out_dir = $parfile","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37467"}},{"Add":{"text":"IO::out_every = 10","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37486"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37487"}},{"Add":{"text":"CarpetX::out_plotfile_groups = \"\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37521"}},{"Add":{"text":"CarpetX::out_silo_vars = \"\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37549"}},{"Add":{"text":"CarpetX::out_tsv = no","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37571"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37572"}},{"Add":{"text":"TimerReport::out_every = 10","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37600"}},{"Add":{"text":"TimerReport::out_filename = \"TimerReport\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37642"}},{"Add":{"text":"TimerReport::output_all_timers = no","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37678"}},{"Add":{"text":"TimerReport::output_all_timers_readable = no","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37723"}},{"Add":{"text":"TimerReport::output_all_timers_together = no","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37768"}},{"Add":{"text":"TimerReport::output_schedule_timers = no","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37809"}},{"Add":{"text":"TimerReport::n_top_timers = 50","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37840"}}]}},{"FileAdd":{"meta":{"basename":"benchmark-minkowski-unigrid.sh","metadata":420},"path":"Z4c/par/benchmark-minkowski-unigrid.sh","context":[{"change":3,"pos":2485}],"contents":[{"Add":{"text":"#!/bin/bash","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37887"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37888"}},{"Add":{"text":"################################################################################","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37969"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37970"}},{"Add":{"text":"$ rm n4-c40-p160-t40","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37991"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:37992"}},{"Add":{"text":"# 256 320 400 512","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38010"}},{"Add":{"text":"for size in 256; do","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38030"}},{"Add":{"text":" for nodes in 4; do # total","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38078"}},{"Add":{"text":" cores=40 # per node","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38135"}},{"Add":{"text":" procs=$((nodes*cores)) # total","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38189"}},{"Add":{"text":" # for threads in 1 2 4 5 8 10 20 40; do # per process","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38251"}},{"Add":{"text":" for threads in 40; do # per process","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38295"}},{"Add":{"text":" name=\"benchmark-minkowski-unigrid-s$size-n$nodes-c$cores-p$procs-t$threads\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38383"}},{"Add":{"text":" ./simfactory/bin/sim purge \"$name\"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38430"}},{"Add":{"text":" ./simfactory/bin/sim submit \"$name\" --parfile arrangements/CarpetX/Z4c/par/benchmark-minkowski-unigrid.par --replace='$ncells='\"$size\" --procs=$procs --num-threads=$threads --walltime=1:0:0 &","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38634"}},{"Add":{"text":" done","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38647"}},{"Add":{"text":" done","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38656"}},{"Add":{"text":"done","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38661"}},{"Add":{"text":"wait","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38666"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38667"}},{"Add":{"text":"################################################################################","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38748"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38749"}},{"Add":{"text":"# Analyse output","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38766"}},{"Add":{"text":"{","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38768"}},{"Add":{"text":" echo 'timesize,nodes,cores_node,threads,threads_process'","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38829"}},{"Add":{"text":" (","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38835"}},{"Add":{"text":" cd /home/eschnetter/simulations;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38876"}},{"Add":{"text":" for file in benchmark-minkowski-unigrid-*/output-0000/benchmark-minkowski-unigrid-*.out; do","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38976"}},{"Add":{"text":" echo \\","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:38995"}},{"Add":{"text":" $(grep Evolve \"$file\" |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39035"}},{"Add":{"text":" tail -n +3 |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39070"}},{"Add":{"text":" awk '{ print $2; }') \\","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39115"}},{"Add":{"text":" $(basename \"$file\" |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39162"}},{"Add":{"text":" sed -e 's/benchmark-minkowski-unigrid-/s256-/' |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39243"}},{"Add":{"text":" sed -e 's/s256-s/s/' |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39298"}},{"Add":{"text":" sed -e 's/\\.out//')","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39350"}},{"Add":{"text":" done","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39363"}},{"Add":{"text":" ) |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39371"}},{"Add":{"text":" sort -n |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39389"}},{"Add":{"text":" sed -e 's/ s/,/;s/-n/,/;s/-c/,/;s/-p/,/;s/-t/,/'","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39446"}},{"Add":{"text":"} |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39450"}},{"Add":{"text":" tee benchmark-minkowski-unigrid.csv","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39490"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39491"}},{"Add":{"text":"# Look for errors","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39509"}},{"Add":{"text":"(","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39511"}},{"Add":{"text":" cd /home/eschnetter/simulations;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39548"}},{"Add":{"text":" for file in benchmark-minkowski-unigrid-*/output-0000/benchmark-minkowski-unigrid-*.out; do","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39644"}},{"Add":{"text":" echo \\","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39659"}},{"Add":{"text":" $(grep Evolve \"$file\" |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39695"}},{"Add":{"text":" tail -n +3 |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39726"}},{"Add":{"text":" wc -l) \\","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39753"}},{"Add":{"text":" $(basename \"$file\" |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39796"}},{"Add":{"text":" sed -e 's/benchmark-minkowski-unigrid-//' |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39868"}},{"Add":{"text":" sed -e 's/\\.out//')","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39916"}},{"Add":{"text":" done","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39925"}},{"Add":{"text":") |","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39929"}},{"Add":{"text":" grep -v '^1'","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39946"}}]}},{"Edit":{"inode":{"change":13,"pos":11},"path":"Z4c/par/qc0.rpar","line":52,"atom":{"NewVertex":{"up_context":[{"change":13,"pos":833}],"down_context":[{"change":13,"pos":833}],"flag":"BLOCK","start":39948,"end":39962,"inode":{"change":13,"pos":11}}},"contents":[{"Add":{"text":" TmunuBase","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:39961"}}]}},{"Edit":{"inode":{"change":3,"pos":5677},"path":"Z4c/schedule.ccl","line":120,"atom":{"NewVertex":{"up_context":[{"change":2,"pos":928}],"down_context":[{"change":2,"pos":928}],"flag":"BLOCK","start":39963,"end":40080,"inode":{"change":3,"pos":5677}}},"contents":[{"Add":{"text":" READS: TmunuBase::eTtt(everywhere)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40001"}},{"Add":{"text":" READS: TmunuBase::eTti(everywhere)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40040"}},{"Add":{"text":" READS: TmunuBase::eTij(everywhere)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40079"}}]}},{"Edit":{"inode":{"change":3,"pos":5677},"path":"Z4c/schedule.ccl","line":206,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":8419}],"down_context":[{"change":3,"pos":8419}],"flag":"BLOCK","start":40081,"end":40186,"inode":{"change":3,"pos":5677}}},"contents":[{"Add":{"text":" READS: TmunuBase::eTtt(interior)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40115"}},{"Add":{"text":" READS: TmunuBase::eTti(interior)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40150"}},{"Add":{"text":" READS: TmunuBase::eTij(interior)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40185"}}]}},{"Replacement":{"inode":{"change":3,"pos":8865},"path":"Z4c/src/adm.cxx","line":30,"ins":{"up_context":[{"change":3,"pos":9668}],"down_context":[{"change":3,"pos":9669}],"flag":"BLOCK","start":40187,"end":40189,"inode":{"change":3,"pos":8865}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":9668},"to":{"change":3,"start":9668,"end":9669},"introduced_by":3}],"inode":{"change":3,"pos":8865}},"ins_contents":[{"Add":{"text":" ","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40188"}}],"del_contents":[{"Del":{"text":"","pos":"GP6UYE5IVVG25EHEMT4EPKFUUWI2QUZSJCRSHOIVTM4AX4IVXBLAC:9668"}}]}},{"Edit":{"inode":{"change":3,"pos":8865},"path":"Z4c/src/adm.cxx","line":49,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":10383}],"down_context":[{"change":3,"pos":10383}],"flag":"BLOCK","start":40190,"end":40824,"inode":{"change":3,"pos":8865}}},"contents":[{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40190"}},{"Add":{"text":" const GF3D gf_eTtt_(cctkGH, eTtt);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40253"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40254"}},{"Add":{"text":" const GF3D gf_eTtx_(cctkGH, eTtx);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40317"}},{"Add":{"text":" const GF3D gf_eTty_(cctkGH, eTty);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40380"}},{"Add":{"text":" const GF3D gf_eTtz_(cctkGH, eTtz);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40443"}},{"Add":{"text":" ","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40445"}},{"Add":{"text":" const GF3D gf_eTxx_(cctkGH, eTxx);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40508"}},{"Add":{"text":" const GF3D gf_eTxy_(cctkGH, eTxy);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40571"}},{"Add":{"text":" const GF3D gf_eTxz_(cctkGH, eTxz);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40634"}},{"Add":{"text":" const GF3D gf_eTyy_(cctkGH, eTyy);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40697"}},{"Add":{"text":" const GF3D gf_eTyz_(cctkGH, eTyz);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40760"}},{"Add":{"text":" const GF3D gf_eTzz_(cctkGH, eTzz);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40823"}}]}},{"Edit":{"inode":{"change":3,"pos":8865},"path":"Z4c/src/adm.cxx","line":102,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":852}],"down_context":[{"change":3,"pos":886}],"flag":"BLOCK","start":40825,"end":41038,"inode":{"change":3,"pos":8865}}},"contents":[{"Add":{"text":" gf_eTtt_, //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40895"}},{"Add":{"text":" gf_eTtx_, gf_eTty_, gf_eTtz_, //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:40966"}},{"Add":{"text":" gf_eTxx_, gf_eTxy_, gf_eTxz_, gf_eTyy_, gf_eTyz_, gf_eTzz_, //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41037"}}]}},{"Edit":{"inode":{"change":3,"pos":35315},"path":"Z4c/src/rhs.cxx","line":105,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":79916}],"down_context":[{"change":3,"pos":37260}],"flag":"BLOCK","start":41039,"end":41103,"inode":{"change":3,"pos":35315}}},"contents":[{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41039"}},{"Add":{"text":" const GF3D gf_eTtt_(cctkGH, eTtt);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41102"}}]}},{"Edit":{"inode":{"change":3,"pos":35315},"path":"Z4c/src/rhs.cxx","line":108,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":37261}],"down_context":[{"change":3,"pos":37261}],"flag":"BLOCK","start":41104,"end":41704,"inode":{"change":3,"pos":35315}}},"contents":[{"Add":{"text":" const vec3, DN> gf_eTti_(","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41162"}},{"Add":{"text":" GF3D(cctkGH, eTtx),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41214"}},{"Add":{"text":" GF3D(cctkGH, eTty),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41266"}},{"Add":{"text":" GF3D(cctkGH, eTtz));","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41319"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41320"}},{"Add":{"text":" const mat3, DN, DN> gf_eTij_(","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41383"}},{"Add":{"text":" GF3D(cctkGH, eTxx),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41435"}},{"Add":{"text":" GF3D(cctkGH, eTxy),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41487"}},{"Add":{"text":" GF3D(cctkGH, eTxz),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41539"}},{"Add":{"text":" GF3D(cctkGH, eTyy),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41591"}},{"Add":{"text":" GF3D(cctkGH, eTyz),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41643"}},{"Add":{"text":" GF3D(cctkGH, eTzz));","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41696"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41697"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41702"}},{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41703"}}]}},{"Edit":{"inode":{"change":3,"pos":35315},"path":"Z4c/src/rhs.cxx","line":157,"atom":{"EdgeMap":{"edges":[{"previous":"","flag":"DELETED","from":{"change":3,"pos":1916},"to":{"change":3,"start":80043,"end":80044},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":80043},"to":{"change":3,"start":80043,"end":80044},"introduced_by":3},{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":80044},"to":{"change":3,"start":1917,"end":2045},"introduced_by":3}],"inode":{"change":3,"pos":35315}}},"contents":[{"Del":{"text":"","pos":"NUOLOGCKMF5UOBGBYEOX4O7NQ5AEVVLCH6KRBQRJQXIRDNJ2C2ZQC:80043"}},{"Del":{"text":" const CCTK_REAL rho{0};","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:1944"}},{"Del":{"text":" const vec3 Si{0, 0, 0};","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:1987"}},{"Del":{"text":" const mat3 Sij{0, 0, 0, 0, 0, 0};","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:2044"}}]}},{"Replacement":{"inode":{"change":3,"pos":35315},"path":"Z4c/src/rhs.cxx","line":168,"ins":{"up_context":[{"change":3,"pos":2667}],"down_context":[{"change":3,"pos":81002}],"flag":"BLOCK","start":41705,"end":41759,"inode":{"change":3,"pos":35315}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":2667},"to":{"change":3,"start":2667,"end":2811},"introduced_by":3}],"inode":{"change":3,"pos":35315}},"ins_contents":[{"Add":{"text":" gf_eTtt_(p.I), gf_eTti_(p.I), gf_eTij_(p.I));","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41758"}}],"del_contents":[{"Del":{"text":" rho, //","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:2731"}},{"Del":{"text":" Si, //","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:2796"}},{"Del":{"text":" Sij);","pos":"2HBMXCNDT3QJWGTNHCJX3IBQ7H3QEGFGMELYYO63P3WDPBTP3JWQC:2810"}}]}},{"Edit":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":36,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":13650}],"down_context":[{"change":3,"pos":41501}],"flag":"BLOCK","start":41760,"end":41855,"inode":{"change":3,"pos":40773}}},"contents":[{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41760"}},{"Add":{"text":" // T_munu variables","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41782"}},{"Add":{"text":" const T eTtt;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41798"}},{"Add":{"text":" const vec3 eTti;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41824"}},{"Add":{"text":" const mat3 eTij;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41854"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":63,"ins":{"up_context":[{"change":3,"pos":42132}],"down_context":[{"change":3,"pos":42205}],"flag":"BLOCK","start":41856,"end":41965,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":42132},"to":{"change":3,"start":14080,"end":14185},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" const T &eTtt, const vec3 &eTti,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41915"}},{"Add":{"text":" const mat3 &eTij)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:41964"}}],"del_contents":[{"Del":{"text":" const T &rho, const vec3 &Si,","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:14136"}},{"Del":{"text":" const mat3 &Sij)","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:14184"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":71,"ins":{"up_context":[{"change":3,"pos":42431}],"down_context":[{"change":3,"pos":42467}],"flag":"BLOCK","start":41966,"end":42677,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":42431},"to":{"change":3,"start":42431,"end":42467},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" eTtt(eTtt), eTti(eTti), eTij(eTij),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42009"}},{"Add":{"text":" // Hydro variables","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42036"}},{"Add":{"text":" // rho = n^a n^b T_ab","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42066"}},{"Add":{"text":" rho([&] {","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42084"}},{"Add":{"text":" return 1 / pow2(alphaG) *","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42120"}},{"Add":{"text":" (eTtt //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42195"}},{"Add":{"text":" - 2 * sum1([&](int x) { return betaG(x) * eTti(x); }) //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42270"}},{"Add":{"text":" + sum2([&](int x, int y) {","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42315"}},{"Add":{"text":" return betaG(x) * betaG(y) * eTij(x, y);","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42378"}},{"Add":{"text":" }));","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42403"}},{"Add":{"text":" }()),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42417"}},{"Add":{"text":" // S_i = -p_i^a n^b T_ab","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42450"}},{"Add":{"text":" Si([&](int a) {","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42474"}},{"Add":{"text":" return -1 / alphaG *","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42505"}},{"Add":{"text":" (eTti(a) //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42534"}},{"Add":{"text":" - sum1([&](int x) { return betaG(x) * eTij(a, x); }));","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42607"}},{"Add":{"text":" }), //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42622"}},{"Add":{"text":" // S_ij = p_i^a p_j^b T_ab","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42657"}},{"Add":{"text":" Sij(eTij),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42676"}}],"del_contents":[{"Del":{"text":" rho(rho), Si(Si), Sij(Sij),","pos":"LAPWK2M55JGEUK5ZGFN5DKUOAV3HJYUBWHO7ZWVU7FBYMCQXHQZAC:42466"}}]}},{"Edit":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":144,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":44467}],"down_context":[{"change":3,"pos":44467}],"flag":"BLOCK","start":42678,"end":43347,"inode":{"change":3,"pos":40773}}},"contents":[{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42700"}},{"Add":{"text":" const GF3D &gf_eTtt_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42760"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42783"}},{"Add":{"text":" const GF3D &gf_eTtx_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42843"}},{"Add":{"text":" const GF3D &gf_eTty_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42903"}},{"Add":{"text":" const GF3D &gf_eTtz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42963"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:42986"}},{"Add":{"text":" const GF3D &gf_eTxx_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43046"}},{"Add":{"text":" const GF3D &gf_eTxy_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43106"}},{"Add":{"text":" const GF3D &gf_eTxz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43166"}},{"Add":{"text":" const GF3D &gf_eTyy_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43226"}},{"Add":{"text":" const GF3D &gf_eTyz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43286"}},{"Add":{"text":" const GF3D &gf_eTzz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43346"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":180,"ins":{"up_context":[{"change":3,"pos":45543}],"down_context":[{"change":3,"pos":45575}],"flag":"BLOCK","start":43348,"end":43390,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":45543},"to":{"change":3,"start":45543,"end":45575},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" gf_eTtt_(I),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43389"}}],"del_contents":[{"Del":{"text":" 0,","pos":"LAPWK2M55JGEUK5ZGFN5DKUOAV3HJYUBWHO7ZWVU7FBYMCQXHQZAC:45574"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":182,"ins":{"up_context":[{"change":3,"pos":45607}],"down_context":[{"change":3,"pos":45654}],"flag":"BLOCK","start":43391,"end":43466,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":45607},"to":{"change":3,"start":14726,"end":14777},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" vec3(gf_eTtx_, gf_eTty_, gf_eTtz_, I),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43465"}}],"del_contents":[{"Del":{"text":" vec3{0, 0, 0},","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:14776"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":184,"ins":{"up_context":[{"change":3,"pos":45686}],"down_context":[{"change":3,"pos":45742}],"flag":"BLOCK","start":43467,"end":43621,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":45686},"to":{"change":3,"start":14778,"end":14842},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" mat3(gf_eTxx_, gf_eTxy_, gf_eTxz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43541"}},{"Add":{"text":" gf_eTyy_, gf_eTyz_, gf_eTzz_, I))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43620"}}],"del_contents":[{"Del":{"text":" mat3{0, 0, 0, 0, 0, 0})","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:14841"}}]}},{"Edit":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":210,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":46354}],"down_context":[{"change":3,"pos":46354}],"flag":"BLOCK","start":43622,"end":43753,"inode":{"change":3,"pos":40773}}},"contents":[{"Add":{"text":"","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43622"}},{"Add":{"text":" // T_munu variables","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43644"}},{"Add":{"text":" using z4c_vars_noderivs::eTtt;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43680"}},{"Add":{"text":" using z4c_vars_noderivs::eTti;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43716"}},{"Add":{"text":" using z4c_vars_noderivs::eTij;","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43752"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":303,"ins":{"up_context":[{"change":3,"pos":48692}],"down_context":[{"change":3,"pos":48756}],"flag":"BLOCK","start":43754,"end":43834,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":48692},"to":{"change":3,"start":16823,"end":16899},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" const T &eTtt, const vec3 &eTti, const mat3 &eTij)","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43833"}}],"del_contents":[{"Del":{"text":" const T &rho, const vec3 &Si, const mat3 &Sij)","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:16898"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":306,"ins":{"up_context":[{"change":3,"pos":48903}],"down_context":[{"change":3,"pos":48947}],"flag":"BLOCK","start":43835,"end":43883,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":48903},"to":{"change":3,"start":48903,"end":48947},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" eTtt, eTti, eTij),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43882"}}],"del_contents":[{"Del":{"text":" rho, Si, Sij),","pos":"LAPWK2M55JGEUK5ZGFN5DKUOAV3HJYUBWHO7ZWVU7FBYMCQXHQZAC:48946"}}]}},{"Edit":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":584,"atom":{"NewVertex":{"up_context":[{"change":3,"pos":60044}],"down_context":[{"change":3,"pos":17795}],"flag":"BLOCK","start":43884,"end":44436,"inode":{"change":3,"pos":40773}}},"contents":[{"Add":{"text":" const GF3D &gf_eTtt_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43934"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43948"}},{"Add":{"text":" const GF3D &gf_eTtx_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:43999"}},{"Add":{"text":" const GF3D &gf_eTty_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44050"}},{"Add":{"text":" const GF3D &gf_eTtz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44101"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44115"}},{"Add":{"text":" const GF3D &gf_eTxx_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44166"}},{"Add":{"text":" const GF3D &gf_eTxy_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44217"}},{"Add":{"text":" const GF3D &gf_eTxz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44268"}},{"Add":{"text":" const GF3D &gf_eTyy_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44319"}},{"Add":{"text":" const GF3D &gf_eTyz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44370"}},{"Add":{"text":" const GF3D &gf_eTzz_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44421"}},{"Add":{"text":" //","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44435"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":658,"ins":{"up_context":[{"change":3,"pos":62599}],"down_context":[{"change":3,"pos":62619}],"flag":"BLOCK","start":44437,"end":44467,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":62599},"to":{"change":3,"start":62599,"end":62619},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" gf_eTtt_(I),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44466"}}],"del_contents":[{"Del":{"text":" 0,","pos":"LAPWK2M55JGEUK5ZGFN5DKUOAV3HJYUBWHO7ZWVU7FBYMCQXHQZAC:62618"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":660,"ins":{"up_context":[{"change":3,"pos":62639}],"down_context":[{"change":3,"pos":62674}],"flag":"BLOCK","start":44468,"end":44531,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":62639},"to":{"change":3,"start":18538,"end":18577},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" vec3(gf_eTtx_, gf_eTty_, gf_eTtz_, I),","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44530"}}],"del_contents":[{"Del":{"text":" vec3{0, 0, 0},","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:18576"}}]}},{"Replacement":{"inode":{"change":3,"pos":40773},"path":"Z4c/src/z4c_vars.hxx","line":662,"ins":{"up_context":[{"change":3,"pos":62694}],"down_context":[{"change":3,"pos":62738}],"flag":"BLOCK","start":44532,"end":44662,"inode":{"change":3,"pos":40773}},"del":{"edges":[{"previous":"BLOCK","flag":"BLOCK | DELETED","from":{"change":3,"pos":62694},"to":{"change":3,"start":18578,"end":18630},"introduced_by":3}],"inode":{"change":3,"pos":40773}},"ins_contents":[{"Add":{"text":" mat3(gf_eTxx_, gf_eTxy_, gf_eTxz_, gf_eTyy_,","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44604"}},{"Add":{"text":" gf_eTyz_, gf_eTzz_, I))","pos":"IOB6SJZRS3PNDFY5SEA5CZS4PW3VGEK36EI6YNZL7IGXQINCUVLAC:44661"}}],"del_contents":[{"Del":{"text":" mat3{0, 0, 0, 0, 0, 0})","pos":"FHE6M7GL6TJSS4VHGV6XY5PQSZBCU6SIXAGZG67Z76NRGKZZAGTQC:18629"}}]}}],"owner":"eschnett","repo":"cactusamrex","login":null}

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