finchie/depwiz - Change UQJO24KBYI77E4J6LXWX2IUN7VABQKG6PGKBKWEPDCH5CKYBTC4AC

Use `forceatlas2` to construct graph layout

Will need a lot of tweaking as the lines overlap more than I would like, and might drop this crate entirely in favour of an algorithm that better represents the tree structure, but may also explore making this the first of many user-selectable layout options.

Created by finchie on April 18, 2024

UQJO24KBYI77E4J6LXWX2IUN7VABQKG6PGKBKWEPDCH5CKYBTC4AC

Dependencies

In channels

main

Change contents

Insertion in src/main.rs at line 1 [3.49]
[3.49]
[4.48]
```
use std::collections::HashMap;
```
Insertion in src/main.rs at line 4 [3.49]
[4.85]
[5.0]
```
use forceatlas2::Layout;
```

Replacement in src/main.rs at line 6 [3.49]

B:BD[5.13] → [5.13:82]

    graph::{DependencyDirection, PackageGraph},
    MetadataCommand,

[5.13]

[6.123]

    graph::{DependencyDirection, PackageGraph, PackageSet},
    MetadataCommand, PackageId,

Insertion in src/main.rs at line 11 [3.49]

[2.2725]

[3.265]


fn graph_layout<'graph>(
    package_set: &'graph PackageSet,
) -> impl Iterator<Item = (&'graph PackageId, forceatlas2::Node<f64, 2>)> {
    let link_index: HashMap<&PackageId, usize> = package_set
        .package_ids(DependencyDirection::Forward)
        .enumerate()
        .map(|(index, id)| (id, index))
        .collect();

Insertion in src/main.rs at line 21 [3.49]

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[5.83]

    let edges = package_set
        .links(DependencyDirection::Forward)
        .map(|link| (link.from(), link.to()))
        .map(|(from, to)| (link_index.get(from.id()), link_index.get(to.id())))
        .map(|(from, to)| (*from.unwrap(), *to.unwrap()))
        .map(|edge| (edge, 1.0))
        .collect();
    let sizes = package_set
        .package_ids(DependencyDirection::Forward)
        .map(|_id| 1.0);
    let mut layout =
        Layout::from_graph_with_degree_mass(edges, sizes, forceatlas2::Settings::default());
    for _step in 0..1_000 {
        layout.iteration();
    }
    // TODO: validate that PackageSet::package_ids() is stable; it is used twice (link_index, here)
    // so need to validate ordering is consistent (or, find a cleaner solution)
    layout
        .nodes
        .into_iter()
        .zip(package_set.package_ids(DependencyDirection::Forward))
        .map(|(node, id)| (id, node))
}

Insertion in src/main.rs at line 52 [3.49]

[5.259]

[4.429]

    let package_set = graph.resolve_all();
    let layout = graph_layout(&package_set);

Replacement in src/main.rs at line 55 [3.49]

B:BD[4.430] → [5.260:541]

    let nodes = graph
        .packages()
        .enumerate()
        .map(|(coords, package)| charming::series::GraphNode {
            id: package.id().repr().to_string(),
            name: package.name().to_string(),
            x: coords as f64,
            y: coords as f64,

[4.430]

[5.541]

    let nodes = layout
        .map(|(id, node)| charming::series::GraphNode {
            id: id.repr().to_string(),
            name: graph.metadata(id).unwrap().name().to_string(),
            x: node.pos.x(),
            y: node.pos.y(),

Insertion in Cargo.toml at line 9 [3.962]
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[5.1337]
```
forceatlas2 = "0.6.1"
```

Insertion in Cargo.lock at line 17 [3.1102]

[5.1621]


[[package]]
name = "autocfg"
version = "1.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "f1fdabc7756949593fe60f30ec81974b613357de856987752631dea1e3394c80"

Insertion in Cargo.lock at line 25 [3.1102]

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name = "bitflags"
version = "1.3.2"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a"
[[package]]

Insertion in Cargo.lock at line 40 [3.1102]

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name = "bumpalo"
version = "3.16.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "79296716171880943b8470b5f8d03aa55eb2e645a4874bdbb28adb49162e012c"
[[package]]

Insertion in Cargo.lock at line 111 [3.1102]

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]
[[package]]
name = "crossbeam-deque"
version = "0.8.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "613f8cc01fe9cf1a3eb3d7f488fd2fa8388403e97039e2f73692932e291a770d"
dependencies = [
 "crossbeam-epoch",
 "crossbeam-utils",

Insertion in Cargo.lock at line 124 [3.1102]

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name = "crossbeam-epoch"
version = "0.9.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5b82ac4a3c2ca9c3460964f020e1402edd5753411d7737aa39c3714ad1b5420e"
dependencies = [
 "crossbeam-utils",
]
[[package]]
name = "crossbeam-utils"
version = "0.8.19"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "248e3bacc7dc6baa3b21e405ee045c3047101a49145e7e9eca583ab4c2ca5345"
[[package]]

Insertion in Cargo.lock at line 160 [3.1102]
[6.2817]
[5.2077]
```
 "forceatlas2",
```

Insertion in Cargo.lock at line 193 [3.1102]

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[6.3064]


[[package]]
name = "forceatlas2"
version = "0.6.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "fe250dab91fc35c905e42a120108569fa5fde2b5aa8aae357dcb1c47c309061f"
dependencies = [
 "bumpalo",
 "num-traits",
 "parking_lot",
 "rand",
 "rayon",
]

Insertion in Cargo.lock at line 313 [3.1102]

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name = "lock_api"
version = "0.4.11"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3c168f8615b12bc01f9c17e2eb0cc07dcae1940121185446edc3744920e8ef45"
dependencies = [
 "autocfg",
 "scopeguard",
]
[[package]]

Insertion in Cargo.lock at line 341 [3.1102]

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name = "num-traits"
version = "0.2.18"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "da0df0e5185db44f69b44f26786fe401b6c293d1907744beaa7fa62b2e5a517a"
dependencies = [
 "autocfg",
]
[[package]]

Insertion in Cargo.lock at line 354 [3.1102]

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[[package]]
name = "parking_lot"
version = "0.12.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "3742b2c103b9f06bc9fff0a37ff4912935851bee6d36f3c02bcc755bcfec228f"
dependencies = [
 "lock_api",
 "parking_lot_core",
]

Insertion in Cargo.lock at line 366 [3.1102]

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name = "parking_lot_core"
version = "0.9.9"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4c42a9226546d68acdd9c0a280d17ce19bfe27a46bf68784e4066115788d008e"
dependencies = [
 "cfg-if",
 "libc",
 "redox_syscall",
 "smallvec",
 "windows-targets",
]
[[package]]

Insertion in Cargo.lock at line 441 [3.1102]

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[[package]]
name = "ppv-lite86"
version = "0.2.17"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "5b40af805b3121feab8a3c29f04d8ad262fa8e0561883e7653e024ae4479e6de"

Insertion in Cargo.lock at line 467 [3.1102]

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name = "rand"
version = "0.8.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "34af8d1a0e25924bc5b7c43c079c942339d8f0a8b57c39049bef581b46327404"
dependencies = [
 "libc",
 "rand_chacha",
 "rand_core",
]
[[package]]
name = "rand_chacha"
version = "0.3.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "e6c10a63a0fa32252be49d21e7709d4d4baf8d231c2dbce1eaa8141b9b127d88"
dependencies = [
 "ppv-lite86",
 "rand_core",
]
[[package]]
name = "rand_core"
version = "0.6.4"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "ec0be4795e2f6a28069bec0b5ff3e2ac9bafc99e6a9a7dc3547996c5c816922c"
dependencies = [
 "getrandom",
]
[[package]]
name = "rayon"
version = "1.10.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "b418a60154510ca1a002a752ca9714984e21e4241e804d32555251faf8b78ffa"
dependencies = [
 "either",
 "rayon-core",
]
[[package]]
name = "rayon-core"
version = "1.12.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "1465873a3dfdaa8ae7cb14b4383657caab0b3e8a0aa9ae8e04b044854c8dfce2"
dependencies = [
 "crossbeam-deque",
 "crossbeam-utils",
]
[[package]]
name = "redox_syscall"
version = "0.4.1"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "4722d768eff46b75989dd134e5c353f0d6296e5aaa3132e776cbdb56be7731aa"
dependencies = [
 "bitflags",
]
[[package]]

Insertion in Cargo.lock at line 532 [3.1102]

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name = "scopeguard"
version = "1.2.0"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "94143f37725109f92c262ed2cf5e59bce7498c01bcc1502d7b9afe439a4e9f49"
[[package]]

Insertion in Cargo.lock at line 680 [3.1102]

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name = "windows-targets"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "9a2fa6e2155d7247be68c096456083145c183cbbbc2764150dda45a87197940c"
dependencies = [
 "windows_aarch64_gnullvm",
 "windows_aarch64_msvc",
 "windows_i686_gnu",
 "windows_i686_msvc",
 "windows_x86_64_gnu",
 "windows_x86_64_gnullvm",
 "windows_x86_64_msvc",
]
[[package]]
name = "windows_aarch64_gnullvm"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "2b38e32f0abccf9987a4e3079dfb67dcd799fb61361e53e2882c3cbaf0d905d8"
[[package]]
name = "windows_aarch64_msvc"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "dc35310971f3b2dbbf3f0690a219f40e2d9afcf64f9ab7cc1be722937c26b4bc"
[[package]]
name = "windows_i686_gnu"
version = "0.48.5"
source = "registry+https://github.com/rust-lang/crates.io-index"
checksum = "a75915e7def60c94dcef72200b9a8e58e5091744960da64ec734a6c6e9b3743e"
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name = "windows_i686_msvc"
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name = "windows_x86_64_gnullvm"
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name = "windows_x86_64_msvc"
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