apraga/org - Change JJ4KXENNDW2GGB6NP5ZJM6QLSMYFULX2QVCVMOG52OTS2BWRIDQAC

Merge branch 'main' of github.com:apraga/org

Created by Alexis Praga on February 22, 2023

JJ4KXENNDW2GGB6NP5ZJM6QLSMYFULX2QVCVMOG52OTS2BWRIDQAC

Dependencies

In channels

main

Change contents

Insertion in projects/bisonex.org at line 3001 [5.35]

[4.2254]

[2.700]

******** Étude
NC_000001.11:924024 :
- bed d’illumina : pas correct
- bed refseq : meux
- bam :  exon non ciblé, probablement parce que Mane select n’a pas été utilisé mais refseq (https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:28706)
NC_000001.11:924310: idem
NC_000001.11:924321: idem
NC_000001.11:924533: idem
NC_000001.11:966227: le bed ne couvre pas le bon exon !
https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr1%3A965863%2D966591&hgsid=295298291_vhDbIv5YIckCKLpGB7UUaZi2cAkr
NC_000001.11:966272

Deletion in projects/bisonex.org at line 3029 [5.35]
B:BD[2.2203] → [2.2203:2205]
Resurrecting zombie bytes in projects/bisonex.org at line 3029 [5.35]
B:B[4.2275] → [3.113:114]
BD:B[4.2275] → [3.113:114]
Solving an order conflict in projects/bisonex.org at line 3029 [5.35]
[2.2203]
[3.113]

Deletion in projects/bisonex.org at line 3030 [5.35]

B:BD[3.114] → [3.114:377]

BD:BD[3.114] → [3.114:377]

******** Étude
NC_000001.11:924024 :
- bed d’illumina : pas correct
- bed refseq : meux
- bam :  exon non ciblé, probablement parce que Mane select n’a pas été utilisé mais refseq (https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:28706)

Deletion in projects/bisonex.org at line 3031 [5.35]

B:BD[3.378] → [3.378:763]

BD:BD[3.378] → [3.378:763]

NC_000001.11:924310: idem
NC_000001.11:924321: idem
NC_000001.11:924533: idem
NC_000001.11:966227: le bed ne couvre pas le bon exon !
https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr1%3A965863%2D966591&hgsid=295298291_vhDbIv5YIckCKLpGB7UUaZi2cAkr
NC_000001.11:966272